RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 SEMA4FO95754 770 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 CHRNB2P17787 502 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 CXCR3P49682 368 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 IRAK1P51617 712 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 ATP11AP98196 1134 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 FMO1Q01740 532 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 SULT2A1Q06520 285 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 NCAPHQ15003 741 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 LAPTM4AQ15012 233 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 CST6Q15828 149 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 ACCSLQ4AC99 568 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 C9orf64Q5T6V5 341 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 N4BP2L1Q5TBK1 243 aaPredicted RBP9.7□□□□□ -0.86
PDPN-204ENST00000475043 CXorf57Q6NSI4 855 aaKnown RBP9.7□□□□□ -0.86
PDPN-204ENST00000475043 CAVIN1Q6NZI2 390 aaKnown RBP9.7□□□□□ -0.86
PDPN-204ENST00000475043 LRRC31Q6UY01 552 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 C14orf80Q86SX3 495 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 MMAAQ8IVH4 418 aaKnown RBP9.7□□□□□ -0.86
PDPN-204ENST00000475043 ZCCHC9Q8N567 271 aaKnown RBP9.7□□□□□ -0.86
PDPN-204ENST00000475043 MINDY1Q8N5J2 469 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 EMC1Q8N766 993 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 KDM1BQ8NB78 822 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 OR2I1PQ8NGU4 316 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 NT5C3BQ969T7 300 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 PGAP3Q96FM1 320 aaPredicted RBP9.7□□□□□ -0.86
PDPN-204ENST00000475043 C11orf70Q9BRQ4 267 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 TMUB1Q9BVT8 246 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 MUC3BQ9H195 1237 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 RSPH9Q9H1X1 276 aaPredicted RBP9.7□□□□□ -0.86
PDPN-204ENST00000475043 C6orf106Q9H6K1 298 aaPredicted RBP9.7□□□□□ -0.86
PDPN-204ENST00000475043 CAPN10Q9HC96 672 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 TMPRSS4Q9NRS4 437 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 FBXL12Q9NXK8 326 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 ARHGEF38Q9NXL2 777 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 SLC25A13Q9UJS0 675 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 VPS28Q9UK41 221 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 SCML1Q9UN30 329 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 SNX10Q9Y5X0 201 aa9.7□□□□□ -0.86
PDPN-204ENST00000475043 SMTNL1A8MU46 457 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 MID1O15344 667 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 BCAT2O15382 392 aaPredicted RBP9.69□□□□□ -0.86
PDPN-204ENST00000475043 SRGAP2O75044 1071 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 RNASEH2AO75792 299 aaKnown RBP9.69□□□□□ -0.86
PDPN-204ENST00000475043 CNTN5O94779 1100 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 FSBPO95073 299 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 IL1BP01584 269 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 CYP1A1P04798 512 aaPredicted RBP9.69□□□□□ -0.86
PDPN-204ENST00000475043 RHOCP08134 193 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 ATP1A3P13637 1013 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 MMP8P22894 467 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 SLC8A1P32418 973 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 RDXP35241 583 aaKnown RBP9.69□□□□□ -0.86
PDPN-204ENST00000475043 NSFP46459 744 aaKnown RBP9.69□□□□□ -0.86
PDPN-204ENST00000475043 PSMD8P48556 350 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 PLK1P53350 603 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 CDH4P55283 916 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 SFSWAPQ12872 951 aaKnown RBP9.69□□□□□ -0.86
PDPN-204ENST00000475043 CDO1Q16878 200 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 ALFQ53S48 1182 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 TRNP1Q6NT89 227 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 ITIH6Q6UXX5 1313 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 TRIM72Q6ZMU5 477 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 FAM131BQ86XD5 332 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 STK40Q8N2I9 435 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 DEFB124Q8NES8 71 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 OR52K2Q8NGK3 314 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 DNASE2BQ8WZ79 361 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 ERGIC2Q96RQ1 377 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 OMDQ99983 421 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 FEM1AQ9BSK4 669 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 PCED1AQ9H1Q7 454 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 HSD3B7Q9H2F3 369 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 PABPC3Q9H361 631 aaKnown RBP9.69□□□□□ -0.86
PDPN-204ENST00000475043 SLC32A1Q9H598 525 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 SGK2Q9HBY8 427 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 ANLNQ9NQW6 1124 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 TMEM51Q9NW97 253 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 MPP6Q9NZW5 540 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 TMEM59LQ9UK28 342 aa9.69□□□□□ -0.86
PDPN-204ENST00000475043 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.69□□□□□ -0.86
PDPN-204ENST00000475043 PLXNA2O75051 1894 aa9.68□□□□□ -0.86
PDPN-204ENST00000475043 A0A1W2PP55 124 aa9.68□□□□□ -0.86
PDPN-204ENST00000475043 LRRC10BA6NIK2 292 aa9.68□□□□□ -0.86
PDPN-204ENST00000475043 E9PAM4 449 aa9.68□□□□□ -0.86
PDPN-204ENST00000475043 I6L893 689 aaPredicted RBP9.68□□□□□ -0.86
PDPN-204ENST00000475043 GPR37O15354 613 aa9.68□□□□□ -0.86
PDPN-204ENST00000475043 BNIP3LO60238 219 aa9.68□□□□□ -0.86
PDPN-204ENST00000475043 GJB6O95452 261 aa9.68□□□□□ -0.86
PDPN-204ENST00000475043 CCDC172P0C7W6 258 aa9.68□□□□□ -0.86
PDPN-204ENST00000475043 CEACAM1P13688 526 aa9.68□□□□□ -0.86
PDPN-204ENST00000475043 VAV1P15498 845 aa9.68□□□□□ -0.86
PDPN-204ENST00000475043 CSRP1P21291 193 aaKnown RBP9.68□□□□□ -0.86
PDPN-204ENST00000475043 OR1E1P30953 314 aa9.68□□□□□ -0.86
PDPN-204ENST00000475043 SDC4P31431 198 aa9.68□□□□□ -0.86
PDPN-204ENST00000475043 KRT83P78385 493 aa9.68□□□□□ -0.86
PDPN-204ENST00000475043 ZNF252P-AS1Q0IIN9 211 aa9.68□□□□□ -0.86
PDPN-204ENST00000475043 GRIK2Q13002 908 aa9.68□□□□□ -0.86
PDPN-204ENST00000475043 ELAVL3Q14576 367 aaKnown RBP9.68□□□□□ -0.86
PDPN-204ENST00000475043 ARID5BQ14865 1188 aa9.68□□□□□ -0.86
PDPN-204ENST00000475043 C15orf59Q2T9L4 293 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms