RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 MAPKAPK2P49137 400 aa20.88■□□□□ 0.93
CDHR3-210ENST00000474330 NRLP54845 237 aa20.88■□□□□ 0.93
CDHR3-210ENST00000474330 BEND6Q5SZJ8 279 aaPredicted RBP20.88■□□□□ 0.93
CDHR3-210ENST00000474330 TFAP2DQ7Z6R9 452 aa20.88■□□□□ 0.93
CDHR3-210ENST00000474330 LRRC49Q8IUZ0 686 aa20.88■□□□□ 0.93
CDHR3-210ENST00000474330 P2RY11Q96G91 374 aa20.88■□□□□ 0.93
CDHR3-210ENST00000474330 PRICKLE1Q96MT3 831 aaPredicted RBP20.88■□□□□ 0.93
CDHR3-210ENST00000474330 TSGA13Q96PP4 275 aa20.88■□□□□ 0.93
CDHR3-210ENST00000474330 NOL6Q9H6R4 1146 aaKnown RBP20.88■□□□□ 0.93
CDHR3-210ENST00000474330 PAK5Q9P286 719 aa20.88■□□□□ 0.93
CDHR3-210ENST00000474330 ZFP37Q9Y6Q3 630 aaPredicted RBP20.88■□□□□ 0.93
CDHR3-210ENST00000474330 SHROOM3Q8TF72 1996 aa20.87■□□□□ 0.93
CDHR3-210ENST00000474330 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.87■□□□□ 0.93
CDHR3-210ENST00000474330 DNALI1O14645 258 aaPredicted RBP20.87■□□□□ 0.93
CDHR3-210ENST00000474330 TP73O15350 636 aa20.87■□□□□ 0.93
CDHR3-210ENST00000474330 PLTPP55058 493 aa20.87■□□□□ 0.93
CDHR3-210ENST00000474330 CDH4P55283 916 aa20.87■□□□□ 0.93
CDHR3-210ENST00000474330 CAV1Q03135 178 aa20.87■□□□□ 0.93
CDHR3-210ENST00000474330 TTC39BQ5VTQ0 682 aaPredicted RBP20.87■□□□□ 0.93
CDHR3-210ENST00000474330 EMBQ6PCB8 327 aa20.87■□□□□ 0.93
CDHR3-210ENST00000474330 C4orf22Q6V702 233 aa20.87■□□□□ 0.93
CDHR3-210ENST00000474330 CFAP52Q8N1V2 620 aa20.87■□□□□ 0.93
CDHR3-210ENST00000474330 FBXO25Q8TCJ0 367 aa20.87■□□□□ 0.93
CDHR3-210ENST00000474330 ADAM7Q9H2U9 754 aa20.87■□□□□ 0.93
CDHR3-210ENST00000474330 NYNRINQ9P2P1 1898 aaKnown RBP20.87■□□□□ 0.93
CDHR3-210ENST00000474330 CHD5Q8TDI0 1954 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 E2F8A0AVK6 867 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 GFRA2O00451 464 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 NDC80O14777 642 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 MTSS1O43312 755 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 CEBPBP17676 345 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 CCNCP24863 283 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 ITGA8P53708 1063 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 IZUMO3Q5VZ72 239 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 CES5AQ6NT32 575 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 CHST9Q7L1S5 443 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 CIR1Q86X95 450 aaPredicted RBP20.86■□□□□ 0.93
CDHR3-210ENST00000474330 CPXM2Q8N436 756 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 SH3RF2Q8TEC5 729 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 USP13Q92995 863 aaPredicted RBP20.86■□□□□ 0.93
CDHR3-210ENST00000474330 SMG9Q9H0W8 520 aaKnown RBP20.86■□□□□ 0.93
CDHR3-210ENST00000474330 TDP1Q9NUW8 608 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 TPX2Q9ULW0 747 aaKnown RBP20.86■□□□□ 0.93
CDHR3-210ENST00000474330 DENND4AQ7Z401 1863 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 DFFAO00273 331 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 TRDMT1O14717 391 aaKnown RBP20.86■□□□□ 0.93
CDHR3-210ENST00000474330 CLDN11O75508 207 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 TCF3P15923 654 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 OR1E1P30953 314 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 YBEYP58557 167 aaPredicted RBP20.86■□□□□ 0.93
CDHR3-210ENST00000474330 RPS24P62847 133 aaKnown RBP20.86■□□□□ 0.93
CDHR3-210ENST00000474330 PCGF5Q86SE9 256 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 CCDC13Q8IYE1 715 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 ITFG1Q8TB96 612 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 CAVIN3Q969G5 261 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 FMO2Q99518 471 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 ANAPC5Q9UJX4 755 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 CCL26Q9Y258 94 aa20.86■□□□□ 0.93
CDHR3-210ENST00000474330 A0A0A0MRY4 1105 aa20.85■□□□□ 0.93
CDHR3-210ENST00000474330 A0A1B0GVM2 712 aa20.85■□□□□ 0.93
CDHR3-210ENST00000474330 TCAF2A6NFQ2 919 aa20.85■□□□□ 0.93
CDHR3-210ENST00000474330 MAFKO60675 156 aa20.85■□□□□ 0.93
CDHR3-210ENST00000474330 STK10O94804 968 aaKnown RBP20.85■□□□□ 0.93
CDHR3-210ENST00000474330 FAM153BP0C7A2 387 aa20.85■□□□□ 0.93
CDHR3-210ENST00000474330 WEE1P30291 646 aa20.85■□□□□ 0.93
CDHR3-210ENST00000474330 CHKAP35790 457 aa20.85■□□□□ 0.93
CDHR3-210ENST00000474330 PAPOLAP51003 745 aaKnown RBP20.85■□□□□ 0.93
CDHR3-210ENST00000474330 SGSHP51688 502 aa20.85■□□□□ 0.93
CDHR3-210ENST00000474330 WASHC5Q12768 1159 aa20.85■□□□□ 0.93
CDHR3-210ENST00000474330 CBX2Q14781 532 aaPredicted RBP20.85■□□□□ 0.93
CDHR3-210ENST00000474330 FAM153CQ494X1 144 aa20.85■□□□□ 0.93
CDHR3-210ENST00000474330 HIBCHQ6NVY1 386 aaPredicted RBP20.85■□□□□ 0.93
CDHR3-210ENST00000474330 RHBDF2Q6PJF5 856 aa20.85■□□□□ 0.93
CDHR3-210ENST00000474330 POTEHQ6S545 545 aa20.85■□□□□ 0.93
CDHR3-210ENST00000474330 ATPAF2Q8N5M1 289 aa20.85■□□□□ 0.93
CDHR3-210ENST00000474330 CCDC110Q8TBZ0 833 aa20.85■□□□□ 0.93
CDHR3-210ENST00000474330 DEPDC1BQ8WUY9 529 aa20.85■□□□□ 0.93
CDHR3-210ENST00000474330 ING5Q8WYH8 240 aa20.85■□□□□ 0.93
CDHR3-210ENST00000474330 ZSWIM3Q96MP5 696 aa20.85■□□□□ 0.93
CDHR3-210ENST00000474330 SPATA13Q96N96 652 aa20.85■□□□□ 0.93
CDHR3-210ENST00000474330 MTRF1LQ9UGC7 380 aaKnown RBP20.85■□□□□ 0.93
CDHR3-210ENST00000474330 FAM153AQ9UHL3 310 aa20.85■□□□□ 0.93
CDHR3-210ENST00000474330 DOCK8Q8NF50 2099 aa20.84■□□□□ 0.93
CDHR3-210ENST00000474330 ARHGAP42A6NI28 874 aa20.84■□□□□ 0.93
CDHR3-210ENST00000474330 RASA4BC9J798 803 aa20.84■□□□□ 0.93
CDHR3-210ENST00000474330 RASA4O43374 803 aa20.84■□□□□ 0.93
CDHR3-210ENST00000474330 TSPAN3O60637 253 aa20.84■□□□□ 0.93
CDHR3-210ENST00000474330 PARP15Q460N3 678 aa20.84■□□□□ 0.93
CDHR3-210ENST00000474330 ANKRD20A2Q5SQ80 823 aa20.84■□□□□ 0.93
CDHR3-210ENST00000474330 RNASEH2BQ5TBB1 312 aaKnown RBP20.84■□□□□ 0.93
CDHR3-210ENST00000474330 ANKRD20A1Q5TYW2 823 aa20.84■□□□□ 0.93
CDHR3-210ENST00000474330 ANKRD20A3Q5VUR7 823 aa20.84■□□□□ 0.93
CDHR3-210ENST00000474330 BBS7Q8IWZ6 715 aa20.84■□□□□ 0.93
CDHR3-210ENST00000474330 TMA16Q96EY4 203 aaKnown RBP20.84■□□□□ 0.93
CDHR3-210ENST00000474330 VAT1Q99536 393 aa20.84■□□□□ 0.93
CDHR3-210ENST00000474330 PHF7Q9BWX1 381 aaPredicted RBP20.84■□□□□ 0.93
CDHR3-210ENST00000474330 FARP1Q9Y4F1 1045 aaPredicted RBP20.84■□□□□ 0.93
CDHR3-210ENST00000474330 LOC730098B7Z3J9 87 aa20.83■□□□□ 0.93
CDHR3-210ENST00000474330 KCNK1O00180 336 aa20.83■□□□□ 0.93
CDHR3-210ENST00000474330 RNF103O00237 685 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms