RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 DNAJC24Q6P3W2 148 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 ALKBH5Q6P6C2 394 aaKnown RBP9.46□□□□□ -0.9
SMC4-213ENST00000472282 DENND1CQ8IV53 801 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 TMEFF1Q8IYR6 380 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 DEFB119Q8N690 84 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 PLD4Q96BZ4 506 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 VCPIP1Q96JH7 1222 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 ISCUQ9H1K1 167 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 NHEJ1Q9H9Q4 299 aaPredicted RBP9.46□□□□□ -0.9
SMC4-213ENST00000472282 VPS45Q9NRW7 570 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 TMEM74BQ9NUR3 256 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 SPTLC3Q9NUV7 552 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.46□□□□□ -0.93e-18■■■■■ 78.4
SMC4-213ENST00000472282 COX16Q9P0S2 106 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 BCCIPQ9P287 314 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMC4-213ENST00000472282 IMPACTQ9P2X3 320 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 TMEM59LQ9UK28 342 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 FBXO10Q9UK96 956 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 AGO1Q9UL18 857 aaKnown RBP9.46□□□□□ -0.9
SMC4-213ENST00000472282 STAP1Q9ULZ2 295 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 NENFQ9UMX5 172 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 STARD13Q9Y3M8 1113 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 ATXN2Q99700 1313 aaKnown RBP9.46□□□□□ -0.9
SMC4-213ENST00000472282 ASCC3Q8N3C0 2202 aaKnown RBP9.46□□□□□ -0.9
SMC4-213ENST00000472282 WDR87Q6ZQQ6 2873 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 TCRBV5S1A1TA0A578 114 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 LNP1A1A4G5 178 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 M0QYT0 321 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 PENKP01210 267 aaPredicted RBP9.45□□□□□ -0.9
SMC4-213ENST00000472282 IGLV3-25P01717 112 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 IGLV3-27P01718 113 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 KRT3P12035 628 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 TFE3P19532 575 aaPredicted RBP9.45□□□□□ -0.9
SMC4-213ENST00000472282 NTSR1P30989 418 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 IRX4P78413 519 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 NME3Q13232 169 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 LYPD4Q6UWN0 246 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 RIPOR1Q6ZS17 1223 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 CYP2U1Q7Z449 544 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 PGBD3Q8N328 593 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 ZNF837Q96EG3 531 aaPredicted RBP9.45□□□□□ -0.9
SMC4-213ENST00000472282 TRIM11Q96F44 468 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 FCRL2Q96LA5 508 aaPredicted RBP9.45□□□□□ -0.9
SMC4-213ENST00000472282 CCDC42Q96M95 316 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 CFAP57Q96MR6 1250 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 MCEEQ96PE7 176 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 XPO6Q96QU8 1125 aaKnown RBP9.45□□□□□ -0.9
SMC4-213ENST00000472282 PANX2Q96RD6 677 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 TBCBQ99426 244 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 NPY6RQ99463 290 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 EDEM2Q9BV94 578 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 KRTAP9-2Q9BYQ4 174 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 DCLK3Q9C098 648 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 FSCN3Q9NQT6 498 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 DDIT4Q9NX09 232 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 CACNA2D2Q9NY47 1150 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 CALCOCO1Q9P1Z2 691 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 MYO1AQ9UBC5 1043 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 CNOT8Q9UFF9 292 aaKnown RBP9.45□□□□□ -0.9
SMC4-213ENST00000472282 TLR6Q9Y2C9 796 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 DYRK1BQ9Y463 629 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 GON4LQ3T8J9 2241 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 SPTBN2O15020 2390 aa9.45□□□□□ -0.9
SMC4-213ENST00000472282 CHD5Q8TDI0 1954 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 NUMA1Q14980 2115 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 C2CD4BA6NLJ0 364 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 SIGLEC16A6NMB1 481 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 C4orf47A7E2U8 309 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 CDX4O14627 284 aaPredicted RBP9.44□□□□□ -0.9
SMC4-213ENST00000472282 FOXD2O60548 495 aaPredicted RBP9.44□□□□□ -0.9
SMC4-213ENST00000472282 ALDH1A2O94788 518 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 MOCS2O96007 188 aaPredicted RBP9.44□□□□□ -0.9
SMC4-213ENST00000472282 CELA2BP08218 269 aaPredicted RBP9.44□□□□□ -0.9
SMC4-213ENST00000472282 MYBL1P10243 752 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 GPD1P21695 349 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 SDC4P31431 198 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 RFC1P35251 1148 aaPredicted RBP9.44□□□□□ -0.9
SMC4-213ENST00000472282 HARS2P49590 506 aaKnown RBP9.44□□□□□ -0.9
SMC4-213ENST00000472282 GALCP54803 685 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 RPL7AP62424 266 aaKnown RBP9.44□□□□□ -0.9
SMC4-213ENST00000472282 ATP11AP98196 1134 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 DEUP1Q05D60 604 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 RING1Q06587 406 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 MAMLD1Q13495 774 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 CDO1Q16878 200 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 C15orf59Q2T9L4 293 aaPredicted RBP9.44□□□□□ -0.9
SMC4-213ENST00000472282 SLC25A52Q3SY17 297 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 ZC3H12AQ5D1E8 599 aaKnown RBP9.44□□□□□ -0.9
SMC4-213ENST00000472282 NUGGCQ68CJ6 796 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 TMEM215Q68D42 235 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 RNF43Q68DV7 783 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 IL31Q6EBC2 164 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 PLEKHA7Q6IQ23 1121 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 DCUN1D2Q6PH85 259 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 ARCQ7LC44 396 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 FAM217AQ8IXS0 508 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 CHPFQ8IZ52 775 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 RXFP2Q8WXD0 754 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 PIGKQ92643 395 aa9.44□□□□□ -0.9
SMC4-213ENST00000472282 ARHGEF26Q96DR7 871 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms