RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 SPATS2LQ9NUQ6 558 aaKnown RBP13.94□□□□□ -0.18
BRCA1-209ENST00000470026 KLHL8Q9P2G9 620 aaPredicted RBP13.94□□□□□ -0.18
BRCA1-209ENST00000470026 POMPQ9Y244 141 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 TBC1D30Q9Y2I9 924 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.94□□□□□ -0.18
BRCA1-209ENST00000470026 CLDN5O00501 218 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 TIMM44O43615 452 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 TRIM13O60858 407 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 CYP2C9P11712 490 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 COX4I1P13073 169 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 PTPN1P18031 435 aaKnown RBP13.94□□□□□ -0.18
BRCA1-209ENST00000470026 HADHAP40939 763 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 HK2P52789 917 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 SNAPC2Q13487 334 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 TNS4Q8IZW8 715 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 FBXW8Q8N3Y1 598 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 TMEM151AQ8N4L1 468 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 OR6J1Q8NGC5 347 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 ZSCAN18Q8TBC5 510 aaPredicted RBP13.94□□□□□ -0.18
BRCA1-209ENST00000470026 URGCPQ8TCY9 931 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 MAPK15Q8TD08 544 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 ZFAND2BQ8WV99 257 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 CNDP1Q96KN2 507 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 PGLYRP2Q96PD5 576 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 AGAP2Q99490 1192 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 RNF39Q9H2S5 420 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 LRRC4Q9HBW1 653 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 TRHDEQ9UKU6 1024 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 GINS2Q9Y248 185 aa13.94□□□□□ -0.18
BRCA1-209ENST00000470026 ENO4A6NNW6 628 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 NRP1O14786 923 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 ZBTB24O43167 697 aaPredicted RBP13.93□□□□□ -0.18
BRCA1-209ENST00000470026 SMIM24O75264 130 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 FBXO21O94952 628 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 C2P06681 752 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 ADAM17P78536 824 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 GALNT2Q10471 571 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 USP4Q13107 963 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 SLC9B1Q4ZJI4 515 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 KIAA0319Q5VV43 1072 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 ACAD11Q709F0 780 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 KBTBD6Q86V97 674 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 NPWQ8N729 165 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 RDH11Q8TC12 318 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 PYDC1Q8WXC3 89 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 AZIN2Q96A70 460 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 VAT1Q99536 393 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 C1QTNF1Q9BXJ1 281 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 GOLGA2P5Q9HBQ8 144 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 OXSMQ9NWU1 459 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 KLK14Q9P0G3 267 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 MID2Q9UJV3 735 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 FBXW11Q9UKB1 542 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 ADAMTS6Q9UKP5 1117 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 ARHGAP26Q9UNA1 814 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 SLC22A2O15244 555 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 CACNG3O60359 315 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 SORBS2O94875 1100 aaKnown RBP13.93□□□□□ -0.18
BRCA1-209ENST00000470026 HSPA4LO95757 839 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 F2P00734 622 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 AMHP03971 560 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 APOA4P06727 396 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 SMIM10L2AP0DMW4 78 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 SMIM10L2BP0DMW5 78 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 DNAJB1P25685 340 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 GTF2A2P52657 109 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 ZNF135P52742 658 aaPredicted RBP13.93□□□□□ -0.18
BRCA1-209ENST00000470026 PRKAA2P54646 552 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 DAOAP59103 153 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 IRF9Q00978 393 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 ASPHQ12797 758 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 NME3Q13232 169 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 MPP3Q13368 585 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 MSLNQ13421 630 aaPredicted RBP13.93□□□□□ -0.18
BRCA1-209ENST00000470026 SNX17Q15036 470 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 LDLRAD1Q5T700 205 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 IQSEC1Q6DN90 963 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 LCA5Q86VQ0 697 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 DEFB107AQ8IZN7 70 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 SIX6OS1Q8N1H7 587 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 GALNT15Q8N3T1 639 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 SPDYE1Q8NFV5 336 aaPredicted RBP13.93□□□□□ -0.18
BRCA1-209ENST00000470026 TMEM40Q8WWA1 233 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 MFSD3Q96ES6 412 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 GPR22Q99680 433 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 GATA5Q9BWX5 397 aaPredicted RBP13.93□□□□□ -0.18
BRCA1-209ENST00000470026 VCX3BQ9H321 246 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 PIDD1Q9HB75 910 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 NMRAL1Q9HBL8 299 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 ANKRD6Q9Y2G4 727 aa13.93□□□□□ -0.18
BRCA1-209ENST00000470026 H3BNX3 289 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 MATN2O00339 956 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 DCXO43602 365 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 PEX1O43933 1283 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 USP12O75317 370 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 PDE5AO76074 875 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 SBK3P0C264 359 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 NCF2P19878 526 aaPredicted RBP13.92□□□□□ -0.18
BRCA1-209ENST00000470026 DNAJB2P25686 324 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 ERFP50548 548 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms