RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 LGI2Q8N0V4 545 aa19.57■□□□□ 0.72
NCKIPSD-209ENST00000470006 SNRNP27Q8WVK2 155 aaKnown RBP19.57■□□□□ 0.72
NCKIPSD-209ENST00000470006 FOXD4L4Q8WXT5 416 aaPredicted RBP19.57■□□□□ 0.72
NCKIPSD-209ENST00000470006 KCTD13Q8WZ19 329 aa19.57■□□□□ 0.72
NCKIPSD-209ENST00000470006 OR8D1Q8WZ84 308 aa19.57■□□□□ 0.72
NCKIPSD-209ENST00000470006 PAGE5Q96GU1 130 aa19.57■□□□□ 0.72
NCKIPSD-209ENST00000470006 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.57■□□□□ 0.72
NCKIPSD-209ENST00000470006 IL17BQ9UHF5 180 aa19.57■□□□□ 0.72
NCKIPSD-209ENST00000470006 TRAF3IP3Q9Y228 551 aa19.57■□□□□ 0.72
NCKIPSD-209ENST00000470006 NEMP2A6NFY4 417 aa19.56■□□□□ 0.72
NCKIPSD-209ENST00000470006 K7ENP7 123 aa19.56■□□□□ 0.72
NCKIPSD-209ENST00000470006 LTFP02788 710 aa19.56■□□□□ 0.72
NCKIPSD-209ENST00000470006 CENPBP07199 599 aaPredicted RBP19.56■□□□□ 0.72
NCKIPSD-209ENST00000470006 GP1BAP07359 652 aa19.56■□□□□ 0.72
NCKIPSD-209ENST00000470006 PRLRP16471 622 aa19.56■□□□□ 0.72
NCKIPSD-209ENST00000470006 ADAM9Q13443 819 aa19.56■□□□□ 0.72
NCKIPSD-209ENST00000470006 ERICH6BQ5W0A0 696 aa19.56■□□□□ 0.72
NCKIPSD-209ENST00000470006 INO80CQ6PI98 192 aaPredicted RBP19.56■□□□□ 0.72
NCKIPSD-209ENST00000470006 IFI44Q8TCB0 444 aa19.56■□□□□ 0.72
NCKIPSD-209ENST00000470006 TJP2Q9UDY2 1190 aa19.56■□□□□ 0.72
NCKIPSD-209ENST00000470006 SARDHQ9UL12 918 aa19.56■□□□□ 0.72
NCKIPSD-209ENST00000470006 MAPK8IP1Q9UQF2 711 aa19.56■□□□□ 0.72
NCKIPSD-209ENST00000470006 PTPN13Q12923 2485 aa19.56■□□□□ 0.72
NCKIPSD-209ENST00000470006 C1QTNF3-AMACRE9PGA6 284 aa19.55■□□□□ 0.72
NCKIPSD-209ENST00000470006 BNIP3LO60238 219 aa19.55■□□□□ 0.72
NCKIPSD-209ENST00000470006 RNGTTO60942 597 aaKnown RBP19.55■□□□□ 0.72
NCKIPSD-209ENST00000470006 PIAS2O75928 621 aa19.55■□□□□ 0.72
NCKIPSD-209ENST00000470006 VDRP11473 427 aa19.55■□□□□ 0.72
NCKIPSD-209ENST00000470006 YWHAEP62258 255 aaKnown RBP19.55■□□□□ 0.72
NCKIPSD-209ENST00000470006 ISXQ2M1V0 245 aa19.55■□□□□ 0.72
NCKIPSD-209ENST00000470006 ZNF542PQ5EBM4 170 aa19.55■□□□□ 0.72
NCKIPSD-209ENST00000470006 RESP18Q5W5W9 173 aa19.55■□□□□ 0.72
NCKIPSD-209ENST00000470006 CHSY1Q86X52 802 aa19.55■□□□□ 0.72
NCKIPSD-209ENST00000470006 IRGQQ8WZA9 623 aa19.55■□□□□ 0.72
NCKIPSD-209ENST00000470006 CCDC47Q96A33 483 aaKnown RBP19.55■□□□□ 0.72
NCKIPSD-209ENST00000470006 ATXN7L3BQ96GX2 97 aa19.55■□□□□ 0.72
NCKIPSD-209ENST00000470006 FCRL2Q96LA5 508 aaPredicted RBP19.55■□□□□ 0.72
NCKIPSD-209ENST00000470006 SERPINB11Q96P15 392 aa19.55■□□□□ 0.72
NCKIPSD-209ENST00000470006 DNAJC28Q9NX36 388 aa19.55■□□□□ 0.72
NCKIPSD-209ENST00000470006 NLGN3Q9NZ94 848 aa19.55■□□□□ 0.72
NCKIPSD-209ENST00000470006 PCDHA7Q9UN72 937 aa19.55■□□□□ 0.72
NCKIPSD-209ENST00000470006 CPED1A4D0V7 1026 aa19.54■□□□□ 0.72
NCKIPSD-209ENST00000470006 STX10O60499 249 aa19.54■□□□□ 0.72
NCKIPSD-209ENST00000470006 PDGFRAP16234 1089 aa19.54■□□□□ 0.72
NCKIPSD-209ENST00000470006 AKT2P31751 481 aa19.54■□□□□ 0.72
NCKIPSD-209ENST00000470006 SULT2A1Q06520 285 aa19.54■□□□□ 0.72
NCKIPSD-209ENST00000470006 AGBL4Q5VU57 503 aa19.54■□□□□ 0.72
NCKIPSD-209ENST00000470006 RAP1GAP2Q684P5 730 aa19.54■□□□□ 0.72
NCKIPSD-209ENST00000470006 SCML4Q8N228 414 aa19.54■□□□□ 0.72
NCKIPSD-209ENST00000470006 CLEC4CQ8WTT0 213 aa19.54■□□□□ 0.72
NCKIPSD-209ENST00000470006 SLC46A1Q96NT5 459 aa19.54■□□□□ 0.72
NCKIPSD-209ENST00000470006 DUSP23Q9BVJ7 150 aa19.54■□□□□ 0.72
NCKIPSD-209ENST00000470006 MIS12Q9H081 205 aa19.54■□□□□ 0.72
NCKIPSD-209ENST00000470006 CAAP1Q9H8G2 361 aa19.54■□□□□ 0.72
NCKIPSD-209ENST00000470006 USP29Q9HBJ7 922 aa19.54■□□□□ 0.72
NCKIPSD-209ENST00000470006 PREBQ9HCU5 417 aa19.54■□□□□ 0.72
NCKIPSD-209ENST00000470006 FZD3Q9NPG1 666 aa19.54■□□□□ 0.72
NCKIPSD-209ENST00000470006 TLR6Q9Y2C9 796 aa19.54■□□□□ 0.72
NCKIPSD-209ENST00000470006 COL12A1Q99715 3063 aa19.54■□□□□ 0.72
NCKIPSD-209ENST00000470006 A0A1W2PQU0 124 aa19.53■□□□□ 0.72
NCKIPSD-209ENST00000470006 NEBLO76041 1014 aa19.53■□□□□ 0.72
NCKIPSD-209ENST00000470006 APOEP02649 317 aa19.53■□□□□ 0.72
NCKIPSD-209ENST00000470006 ENPEPQ07075 957 aa19.53■□□□□ 0.72
NCKIPSD-209ENST00000470006 CUL2Q13617 745 aa19.53■□□□□ 0.72
NCKIPSD-209ENST00000470006 CDKN3Q16667 212 aa19.53■□□□□ 0.72
NCKIPSD-209ENST00000470006 PMF1Q6P1K2 205 aa19.53■□□□□ 0.72
NCKIPSD-209ENST00000470006 OR13H1Q8NG92 308 aa19.53■□□□□ 0.72
NCKIPSD-209ENST00000470006 DQX1Q8TE96 717 aaKnown RBP19.53■□□□□ 0.72
NCKIPSD-209ENST00000470006 EEF2KMTQ96G04 330 aa19.53■□□□□ 0.72
NCKIPSD-209ENST00000470006 ARHGAP9Q9BRR9 750 aa19.53■□□□□ 0.72
NCKIPSD-209ENST00000470006 SLC25A13Q9UJS0 675 aa19.53■□□□□ 0.72
NCKIPSD-209ENST00000470006 K7ESM1 405 aa19.52■□□□□ 0.72
NCKIPSD-209ENST00000470006 O00370 1275 aa19.52■□□□□ 0.72
NCKIPSD-209ENST00000470006 ACTN4O43707 911 aaKnown RBP19.52■□□□□ 0.72
NCKIPSD-209ENST00000470006 TACR2P21452 398 aa19.52■□□□□ 0.72
NCKIPSD-209ENST00000470006 TGM2P21980 687 aa19.52■□□□□ 0.72
NCKIPSD-209ENST00000470006 SLC12A1Q13621 1099 aa19.52■□□□□ 0.72
NCKIPSD-209ENST00000470006 NFIL3Q16649 462 aa19.52■□□□□ 0.72
NCKIPSD-209ENST00000470006 TCERG1LQ5VWI1 586 aa19.52■□□□□ 0.72
NCKIPSD-209ENST00000470006 LURAP1LQ8IV03 231 aa19.52■□□□□ 0.72
NCKIPSD-209ENST00000470006 ARL14Q8N4G2 192 aa19.52■□□□□ 0.72
NCKIPSD-209ENST00000470006 TMEM145Q8NBT3 493 aa19.52■□□□□ 0.72
NCKIPSD-209ENST00000470006 RNF34Q969K3 372 aa19.52■□□□□ 0.72
NCKIPSD-209ENST00000470006 ARRDC3Q96B67 414 aa19.52■□□□□ 0.72
NCKIPSD-209ENST00000470006 FAM149B1Q96BN6 582 aa19.52■□□□□ 0.72
NCKIPSD-209ENST00000470006 XPO7Q9UIA9 1087 aaKnown RBP19.52■□□□□ 0.72
NCKIPSD-209ENST00000470006 KIAA1257Q9ULG3 409 aa19.52■□□□□ 0.72
NCKIPSD-209ENST00000470006 KIF26BQ2KJY2 2108 aa19.51■□□□□ 0.71
NCKIPSD-209ENST00000470006 F5H5T6 163 aa19.51■□□□□ 0.71
NCKIPSD-209ENST00000470006 M0QYV0 167 aa19.51■□□□□ 0.71
NCKIPSD-209ENST00000470006 SCAMP1O15126 338 aa19.51■□□□□ 0.71
NCKIPSD-209ENST00000470006 GIMD1P0DJR0 217 aa19.51■□□□□ 0.71
NCKIPSD-209ENST00000470006 CLDN2P57739 230 aa19.51■□□□□ 0.71
NCKIPSD-209ENST00000470006 LRMPQ12912 555 aa19.51■□□□□ 0.71
NCKIPSD-209ENST00000470006 IGF2-ASQ6U949 168 aa19.51■□□□□ 0.71
NCKIPSD-209ENST00000470006 LCLAT1Q6UWP7 414 aa19.51■□□□□ 0.71
NCKIPSD-209ENST00000470006 RBM44Q6ZP01 1051 aaKnown RBP19.51■□□□□ 0.71
NCKIPSD-209ENST00000470006 EFL1Q7Z2Z2 1120 aaKnown RBP19.51■□□□□ 0.71
NCKIPSD-209ENST00000470006 PTAR1Q7Z6K3 402 aaPredicted RBP19.51■□□□□ 0.71
NCKIPSD-209ENST00000470006 FRS2Q8WU20 508 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms