RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 RACGAP1Q9H0H5 632 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 AASDHPPTQ9NRN7 309 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 SNX6Q9UNH7 406 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.86□□□□□ -0.99
HPS4-209ENST00000466781 RIC1Q4ADV7 1423 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 ZMYM2Q9UBW7 1377 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 H3BN98 237 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 MYL12BO14950 172 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 KLHL41O60662 606 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 ECDO95905 644 aaPredicted RBP8.86□□□□□ -0.99
HPS4-209ENST00000466781 CNTN2Q02246 1040 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 TROAPQ12815 778 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 AGKQ53H12 422 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 TREML2Q5T2D2 321 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 RSBN1Q5VWQ0 802 aaPredicted RBP8.86□□□□□ -0.99
HPS4-209ENST00000466781 R3HCC1LQ7Z5L2 792 aaKnown RBP8.86□□□□□ -0.99
HPS4-209ENST00000466781 KCNMB4Q86W47 210 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 C4orf19Q8IY42 314 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 SVOPQ8N4V2 548 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 RERGQ96A58 199 aaPredicted RBP8.86□□□□□ -0.99
HPS4-209ENST00000466781 CATSPER2Q96P56 530 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 BTBD9Q96Q07 612 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 WDR18Q9BV38 432 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 TMEM51Q9NW97 253 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 VTI1BQ9UEU0 232 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 FAM153AQ9UHL3 310 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 TAGLN3Q9UI15 199 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 ZMYM5Q9UJ78 669 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 TMEM150BA6NC51 233 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 TMEM191CA6NGB0 347 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 MOXD2PA6NHM9 499 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 A8MX80 341 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 H7C0S8 307 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 SLC25A12O75746 678 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 PGAM1P18669 254 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 NDST1P52848 882 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 MAPK7Q13164 816 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 PEX6Q13608 980 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 PABPC1LQ4VXU2 614 aaKnown RBP8.86□□□□□ -0.99
HPS4-209ENST00000466781 C2CD6Q53TS8 623 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 CELF3Q5SZQ8 465 aaKnown RBP8.86□□□□□ -0.99
HPS4-209ENST00000466781 PMF1Q6P1K2 205 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 SCUBE1Q8IWY4 988 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 SLAIN1Q8ND83 568 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 MTFMTQ96DP5 389 aaKnown RBP8.86□□□□□ -0.99
HPS4-209ENST00000466781 PHF21BQ96EK2 531 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 UROC1Q96N76 676 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 ZNF558Q96NG5 402 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 UNKQ9C0B0 810 aaKnown RBP8.86□□□□□ -0.99
HPS4-209ENST00000466781 TSPAN16Q9UKR8 245 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 SH3GLB1Q9Y371 365 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 TRIM43BA6NCK2 446 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 O00370 1275 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 FOXN3O00409 490 aaPredicted RBP8.86□□□□□ -0.99
HPS4-209ENST00000466781 ADCY6O43306 1168 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 ANXA5P08758 320 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 LSP1P33241 339 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 RCN1Q15293 331 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 TBCELQ5QJ74 424 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 PDZK1Q5T2W1 519 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 RIPOR1Q6ZS17 1223 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 SYT12Q8IV01 421 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 IZUMO1Q8IYV9 350 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 LZTR1Q8N653 840 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 EPS8L3Q8TE67 593 aaKnown RBP8.86□□□□□ -0.99
HPS4-209ENST00000466781 TMEM121Q9BTD3 319 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 CLEC4MQ9H2X3 399 aaPredicted RBP8.86□□□□□ -0.99
HPS4-209ENST00000466781 TFR2Q9UP52 801 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 PCDHB9Q9Y5E1 797 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 ZNF862O60290 1169 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 OR6B1O95007 311 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 SLURP2P0DP57 97 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 MCL1Q07820 350 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 CRY1Q16526 586 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 ZNF57Q68EA5 555 aaPredicted RBP8.86□□□□□ -0.99
HPS4-209ENST00000466781 ALKBH2Q6NS38 261 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 SLC26A11Q86WA9 606 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 PALB2Q86YC2 1186 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 VGLL2Q8N8G2 317 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 TRAPPC12Q8WVT3 735 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 DEFB118Q96PH6 123 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 PURBQ96QR8 312 aaKnown RBP8.86□□□□□ -0.99
HPS4-209ENST00000466781 TMEM120AQ9BXJ8 343 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 A0A087X1B8 175 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 MGRN1O60291 552 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 OR10H2O60403 315 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 PIK3R1P27986 724 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 FMO4P31512 558 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 MAPKAPK2P49137 400 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 AQP5P55064 265 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 REXO5Q96IC2 774 aaKnown RBP8.85□□□□□ -0.99
HPS4-209ENST00000466781 CPNE1Q99829 537 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 MID1IP1Q9NPA3 183 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 TRHDEQ9UKU6 1024 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 USP20Q9Y2K6 914 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 MAGEA13PA6NCF6 341 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 OPLAHO14841 1288 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 LGALS2P05162 132 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 TSPAN19P0C672 248 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 HSD17B3P37058 310 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms