RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 ZCCHC9Q8N567 271 aaKnown RBP10.3□□□□□ -0.76
PMF1-204ENST00000466489 CCDC63Q8NA47 563 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 ST13P5Q8NFI4 369 aaPredicted RBP10.3□□□□□ -0.76
PMF1-204ENST00000466489 DQX1Q8TE96 717 aaKnown RBP10.3□□□□□ -0.76
PMF1-204ENST00000466489 EDAQ92838 391 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 ARHGEF2Q92974 986 aaKnown RBP10.3□□□□□ -0.76
PMF1-204ENST00000466489 PCDHB18PQ96TA0 734 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 SELENOSQ9BQE4 189 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 KLF16Q9BXK1 252 aaPredicted RBP10.3□□□□□ -0.76
PMF1-204ENST00000466489 COL25A1Q9BXS0 654 aaPredicted RBP10.3□□□□□ -0.76
PMF1-204ENST00000466489 C8orf33Q9H7E9 229 aaPredicted RBP10.3□□□□□ -0.76
PMF1-204ENST00000466489 CD320Q9NPF0 282 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 GKN1Q9NS71 199 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 SMARCAL1Q9NZC9 954 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 GRHL1Q9NZI5 618 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 CNOT8Q9UFF9 292 aaKnown RBP10.3□□□□□ -0.76
PMF1-204ENST00000466489 NAALADL1Q9UQQ1 740 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 TLR6Q9Y2C9 796 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 MRPS17Q9Y2R5 130 aaKnown RBP10.3□□□□□ -0.76
PMF1-204ENST00000466489 BDP1A6H8Y1 2624 aa10.3□□□□□ -0.76
PMF1-204ENST00000466489 TLDC2A0PJX2 215 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 MAN2B1O00754 1011 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 MDM4O15151 490 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 GRAP2O75791 330 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 GABBR2O75899 941 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 WFS1O76024 890 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 STC2O76061 302 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 LATS1O95835 1130 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 TRUB2O95900 331 aaKnown RBP10.29□□□□□ -0.76
PMF1-204ENST00000466489 CYBBP04839 570 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 KRT7P08729 469 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 CORO1AP31146 461 aaKnown RBP10.29□□□□□ -0.76
PMF1-204ENST00000466489 STX2P32856 288 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 PGFP49763 221 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 SULT1E1P49888 294 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 MLLT6P55198 1093 aaPredicted RBP10.29□□□□□ -0.76
PMF1-204ENST00000466489 PRKCQQ04759 706 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 RUNX3Q13761 415 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 SEPT7Q16181 437 aaKnown RBP10.29□□□□□ -0.76
PMF1-204ENST00000466489 PREPLQ4J6C6 727 aaPredicted RBP10.29□□□□□ -0.76
PMF1-204ENST00000466489 ACBD5Q5T8D3 534 aaPredicted RBP10.29□□□□□ -0.76
PMF1-204ENST00000466489 FYB2Q5VWT5 728 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 RNF43Q68DV7 783 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 HFE2Q6ZVN8 426 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 HTR3DQ70Z44 454 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 GSTA5Q7RTV2 222 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 POLNQ7Z5Q5 900 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 MCOLN2Q8IZK6 566 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 ALG3Q92685 438 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 SLC2A13Q96QE2 648 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 RPP25Q9BUL9 199 aaKnown RBP10.29□□□□□ -0.76
PMF1-204ENST00000466489 PLA2G2FQ9BZM2 168 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 PRDM16Q9HAZ2 1276 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 SLC40A1Q9NP59 571 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 ARHGEF3Q9NR81 526 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 METTL5Q9NRN9 209 aaKnown RBP10.29□□□□□ -0.76
PMF1-204ENST00000466489 DDIT4Q9NX09 232 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 TJP2Q9UDY2 1190 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 SFMBT1Q9UHJ3 866 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 WNT6Q9Y6F9 365 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 MIA3Q5JRA6 1907 aa10.29□□□□□ -0.76
PMF1-204ENST00000466489 FAM47DPA6NHR8 397 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 PI4K2BG5E9Z4 385 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 M0QYT0 321 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 STK25O00506 426 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 PRPF4O43172 522 aaKnown RBP eCLIP10.28□□□□□ -0.76
PMF1-204ENST00000466489 IRAK2O43187 625 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 MSI1O43347 362 aaKnown RBP10.28□□□□□ -0.76
PMF1-204ENST00000466489 NARSO43776 548 aaKnown RBP10.28□□□□□ -0.76
PMF1-204ENST00000466489 SNX3O60493 162 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 ZWINTO95229 277 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 RARAP10276 462 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 PYGMP11217 842 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 PDGFRAP16234 1089 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 GPD1P21695 349 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 CCR1P32246 355 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 RPL21P46778 160 aaKnown RBP10.28□□□□□ -0.76
PMF1-204ENST00000466489 CBLBQ13191 982 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 NME3Q13232 169 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 SPARCL1Q14515 664 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 MLF2Q15773 248 aaPredicted RBP10.28□□□□□ -0.76
PMF1-204ENST00000466489 HADHQ16836 314 aaKnown RBP10.28□□□□□ -0.76
PMF1-204ENST00000466489 ARL13BQ3SXY8 428 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 SLC25A52Q3SY17 297 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 CCDC38Q502W7 563 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 SLC44A4Q53GD3 710 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 C2CD6Q53TS8 623 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 POTEHQ6S545 545 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 ZDHHC24Q6UX98 284 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 TRIM67Q6ZTA4 783 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 NUDT18Q6ZVK8 323 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 CENPUQ71F23 418 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 TAC4Q86UU9 113 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 RALGPS2Q86X27 583 aaPredicted RBP10.28□□□□□ -0.76
PMF1-204ENST00000466489 CCDC117Q8IWD4 279 aaPredicted RBP10.28□□□□□ -0.76
PMF1-204ENST00000466489 TRIM42Q8IWZ5 723 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 AGGF1Q8N302 714 aaeCLIP10.28□□□□□ -0.76
PMF1-204ENST00000466489 ATP6V0D2Q8N8Y2 350 aa10.28□□□□□ -0.76
PMF1-204ENST00000466489 ZNF557Q8N988 423 aaPredicted RBP10.28□□□□□ -0.76
PMF1-204ENST00000466489 CKAP2Q8WWK9 683 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms