RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 HOXB2P14652 356 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 ITPKAP23677 461 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 NTSR1P30989 418 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 HOXD12P35452 270 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 SCAPQ12770 1279 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 ERMARDQ5T6L9 678 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 LRRC38Q5VT99 294 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 GRAMD4Q6IC98 578 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 TRNP1Q6NT89 227 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 SLC23A3Q6PIS1 610 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 Q6ZNB5 142 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 POLNQ7Z5Q5 900 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 FAM131BQ86XD5 332 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 MAP7D3Q8IWC1 876 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 DEFB124Q8NES8 71 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 TEKT4Q8WW24 435 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 ZNF830Q96NB3 372 aaPredicted RBP17.97■□□□□ 0.47
CPSF4-209ENST00000465132 LACRTQ9GZZ8 138 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 OSBPL2Q9H1P3 480 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 KCNF1Q9H3M0 494 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 DNAJC17Q9NVM6 304 aaKnown RBP17.97■□□□□ 0.47
CPSF4-209ENST00000465132 CALCOCO1Q9P1Z2 691 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 ATXN2Q99700 1313 aaKnown RBP17.97■□□□□ 0.47
CPSF4-209ENST00000465132 MACROD2A1Z1Q3 448 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 C1QTNF9BB2RNN3 333 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 NEDD8-MDP1E9PL57 170 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 CACNG3O60359 315 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 LRCH4O75427 683 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 C1QTNF9P0C862 333 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 ENGP17813 658 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 MIPP30301 263 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 WASP42768 502 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 MAPK8P45983 427 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 OGDHQ02218 1023 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 MPPE1Q53F39 396 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 MPP7Q5T2T1 576 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 EGFLAMQ63HQ2 1017 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 UNQ6494/PRO21346Q6UXR6 183 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 SLC36A4Q6YBV0 504 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 RHOT1Q8IXI2 618 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 TRIM58Q8NG06 486 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 TPCN2Q8NHX9 752 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 XPO6Q96QU8 1125 aaKnown RBP17.96■□□□□ 0.47
CPSF4-209ENST00000465132 ACOX2Q99424 681 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 EPAS1Q99814 870 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 BBS2Q9BXC9 721 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 LZTFL1Q9NQ48 299 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 DDX56Q9NY93 547 aaKnown RBP17.96■□□□□ 0.47
CPSF4-209ENST00000465132 MARK1Q9P0L2 795 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 STIM2Q9P246 746 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 CEP295Q9C0D2 2601 aa17.96■□□□□ 0.47
CPSF4-209ENST00000465132 TMEM110-MUSTN1A8MSY1 372 aa17.95■□□□□ 0.46
CPSF4-209ENST00000465132 MIF4GDA9UHW6 222 aaKnown RBP17.95■□□□□ 0.46
CPSF4-209ENST00000465132 BUB1O43683 1085 aa17.95■□□□□ 0.46
CPSF4-209ENST00000465132 BUB1BO60566 1050 aaPredicted RBP17.95■□□□□ 0.46
CPSF4-209ENST00000465132 PAGE1O75459 146 aa17.95■□□□□ 0.46
CPSF4-209ENST00000465132 TYRP14679 529 aa17.95■□□□□ 0.46
CPSF4-209ENST00000465132 SPINK2P20155 84 aa17.95■□□□□ 0.46
CPSF4-209ENST00000465132 CETN2P41208 172 aa17.95■□□□□ 0.46
CPSF4-209ENST00000465132 OXCT1P55809 520 aa17.95■□□□□ 0.46
CPSF4-209ENST00000465132 PITX1P78337 314 aaPredicted RBP17.95■□□□□ 0.46
CPSF4-209ENST00000465132 NRG1Q02297 640 aaPredicted RBP17.95■□□□□ 0.46
CPSF4-209ENST00000465132 RPL6Q02878 288 aaKnown RBP17.95■□□□□ 0.46
CPSF4-209ENST00000465132 ZFYVE27Q5T4F4 411 aa17.95■□□□□ 0.46
CPSF4-209ENST00000465132 OTUD1Q5VV17 481 aaPredicted RBP17.95■□□□□ 0.46
CPSF4-209ENST00000465132 TPGS1Q6ZTW0 290 aa17.95■□□□□ 0.46
CPSF4-209ENST00000465132 CHSY1Q86X52 802 aa17.95■□□□□ 0.46
CPSF4-209ENST00000465132 FAM217AQ8IXS0 508 aa17.95■□□□□ 0.46
CPSF4-209ENST00000465132 HJURPQ8NCD3 748 aaPredicted RBP17.95■□□□□ 0.46
CPSF4-209ENST00000465132 CD248Q9HCU0 757 aa17.95■□□□□ 0.46
CPSF4-209ENST00000465132 ALG6Q9Y672 507 aa17.95■□□□□ 0.46
CPSF4-209ENST00000465132 PLXND1Q9Y4D7 1925 aa17.95■□□□□ 0.46
CPSF4-209ENST00000465132 TNRC6BQ9UPQ9 1833 aaKnown RBP17.95■□□□□ 0.46
CPSF4-209ENST00000465132 RCCD1A6NED2 376 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 PSTPIP1O43586 416 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 KIF5CO60282 957 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 TOP3BO95985 862 aaKnown RBP17.94■□□□□ 0.46
CPSF4-209ENST00000465132 KLKB1P03952 638 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 CFIP05156 583 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 TFE3P19532 575 aaPredicted RBP17.94■□□□□ 0.46
CPSF4-209ENST00000465132 TACR2P21452 398 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 PDK2Q15119 407 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 E2F5Q15329 346 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 DUOXA1Q1HG43 343 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 SDE2Q6IQ49 451 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 PEX26Q7Z412 305 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 CHPFQ8IZ52 775 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 DEFB119Q8N690 84 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 UBL4BQ8N7F7 174 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 CEP76Q8TAP6 659 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 TMA16Q96EY4 203 aaKnown RBP17.94■□□□□ 0.46
CPSF4-209ENST00000465132 BTBD6Q96KE9 485 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 GABRG3Q99928 467 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 TMEM121BQ9BXQ6 578 aaPredicted RBP17.94■□□□□ 0.46
CPSF4-209ENST00000465132 TRIM7Q9C029 511 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 SIK2Q9H0K1 926 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 ZWILCHQ9H900 591 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 OR12D3Q9UGF7 316 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 PCSK1NQ9UHG2 260 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 AMFRQ9UKV5 643 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms