RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 RPL10LQ96L21 214 aaKnown RBP14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 MRGPRX3Q96LB0 322 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 KCTD15Q96SI1 283 aaPredicted RBP14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 CD248Q9HCU0 757 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 NDFIP2Q9NV92 336 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 BCCIPQ9P287 314 aaKnown RBP eCLIP14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 SUN2Q9UH99 717 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 DNAI1Q9UI46 699 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 FANCMQ8IYD8 2048 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 TMEM110-MUSTN1A8MSY1 372 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 WASH4PA8MWX3 477 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 FGF10O15520 208 aaPredicted RBP14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 DAPK3O43293 454 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 LILRB5O75023 590 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 RARAP10276 462 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 MAN1A1P33908 653 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 CNR2P34972 360 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 NNMTP40261 264 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 NBL1P41271 181 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 NOP2P46087 812 aaKnown RBP14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 ZNF135P52742 658 aaPredicted RBP14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 GNA12Q03113 381 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 DPYSL2Q16555 572 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 PPP6R3Q5H9R7 873 aaPredicted RBP14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 TXNRD3NBQ6F5E7 133 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 PGBD3Q8N328 593 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 RTL3Q8N8U3 475 aaKnown RBP14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 MDGA1Q8NFP4 955 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 OR7D4Q8NG98 312 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 HSPH1Q92598 858 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 SPON2Q9BUD6 331 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 C2orf49Q9BVC5 232 aaPredicted RBP14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 DONSONQ9NYP3 566 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 SLCO3A1Q9UIG8 710 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 SLC25A13Q9UJS0 675 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 USP34Q70CQ2 3546 aa14.88□□□□□ -0.03
SQSTM1-205ENST00000464493 GOT1P17174 413 aa14.87□□□□□ -0.03
SQSTM1-205ENST00000464493 GABRG2P18507 467 aa14.87□□□□□ -0.03
SQSTM1-205ENST00000464493 ETFBP38117 255 aa14.87□□□□□ -0.03
SQSTM1-205ENST00000464493 HCAR3P49019 387 aa14.87□□□□□ -0.03
SQSTM1-205ENST00000464493 STK19P49842 368 aaPredicted RBP14.87□□□□□ -0.03
SQSTM1-205ENST00000464493 VASPP50552 380 aaPredicted RBP14.87□□□□□ -0.03
SQSTM1-205ENST00000464493 POLD3Q15054 466 aaPredicted RBP14.87□□□□□ -0.03
SQSTM1-205ENST00000464493 IL31Q6EBC2 164 aa14.87□□□□□ -0.03
SQSTM1-205ENST00000464493 RFX8Q6ZV50 586 aa14.87□□□□□ -0.03
SQSTM1-205ENST00000464493 CPNE8Q86YQ8 564 aa14.87□□□□□ -0.03
SQSTM1-205ENST00000464493 ZNF366Q8N895 744 aa14.87□□□□□ -0.03
SQSTM1-205ENST00000464493 DCAF4L2Q8NA75 395 aa14.87□□□□□ -0.03
SQSTM1-205ENST00000464493 PSMB7Q99436 277 aa14.87□□□□□ -0.03
SQSTM1-205ENST00000464493 MAGEH1Q9H213 219 aa14.87□□□□□ -0.03
SQSTM1-205ENST00000464493 ATP13A1Q9HD20 1204 aa14.87□□□□□ -0.03
SQSTM1-205ENST00000464493 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.87□□□□□ -0.03
SQSTM1-205ENST00000464493 CWC15Q9P013 229 aaKnown RBP14.87□□□□□ -0.03
SQSTM1-205ENST00000464493 VPS51Q9UID3 782 aa14.87□□□□□ -0.03
SQSTM1-205ENST00000464493 TFR2Q9UP52 801 aa14.87□□□□□ -0.03
SQSTM1-205ENST00000464493 MUC22E2RYF6 1773 aaPredicted RBP14.87□□□□□ -0.03
SQSTM1-205ENST00000464493 CKAP5Q14008 2032 aa14.87□□□□□ -0.03
SQSTM1-205ENST00000464493 A0A0A6YYK5 440 aaPredicted RBP14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 TTC34A8MYJ7 566 aa14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 CBX4O00257 560 aa14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 HRO43593 1189 aa14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 SNAP91O60641 907 aa14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 RAMP2O60895 175 aa14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 NDUFV2P19404 249 aa14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 ACVRL1P37023 503 aa14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 ARL4AP40617 200 aa14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 HADHBP55084 474 aaKnown RBP14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 YBEYP58557 167 aaPredicted RBP14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 TAS2R40P59535 323 aa14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 CAMK2GQ13555 558 aaPredicted RBP14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 HNRNPA1L2Q32P51 320 aaKnown RBP14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 USP39Q53GS9 565 aaKnown RBP14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 TMPRSS6Q8IU80 811 aa14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 ACRBPQ8NEB7 543 aa14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 ARHGEF2Q92974 986 aaKnown RBP14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 MRGPRX1Q96LB2 322 aa14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 ACE2Q9BYF1 805 aaPredicted RBP14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 TPSD1Q9BZJ3 242 aa14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 SEMA4AQ9H3S1 761 aa14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 MTG2Q9H4K7 406 aa14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 PRSS16Q9NQE7 514 aa14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 HPCAL4Q9UM19 191 aa14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 REXO2Q9Y3B8 237 aaKnown RBP14.86□□□□□ -0.03
SQSTM1-205ENST00000464493 CHD5Q8TDI0 1954 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 EDDM13A0A1B0GTR0 161 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 TARSL2A2RTX5 802 aaKnown RBP14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 RCCD1A6NED2 376 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 H3BRJ5 948 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 ATP9BO43861 1147 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 RPP40O75818 363 aaKnown RBP14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 MT-CO1P00395 513 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 KRT7P08729 469 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 ERCC2P18074 760 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 GLDCP23378 1020 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 SLC1A1P43005 524 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 COPAP53621 1224 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 CDH6P55285 790 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 SLC20A2Q08357 652 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 SRSF5Q13243 272 aaKnown RBP14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 KRT81Q14533 505 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms