RNA–Protein interactions for RNA: ENST00000461612.1

PRPF4B-202, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-202ENST00000461612 CNTNAP1P78357 1384 aa5□□□□□ -1.61
PRPF4B-202ENST00000461612 CEMIPQ8WUJ3 1361 aa5□□□□□ -1.61
PRPF4B-202ENST00000461612 PASKQ96RG2 1323 aa4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 LOC102724159A0A0B4J2E5 919 aa4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 EFCAB8A8MWE9 144 aa4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 IFRD1O00458 451 aaPredicted RBP4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 DNPH1O43598 174 aa4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 TCEA3O75764 348 aa4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 BBOX1O75936 387 aa4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 LATS1O95835 1130 aa4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 NHLRC4P0CG21 123 aaPredicted RBP4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 CERS1P27544 350 aa4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 MAP2K2P36507 400 aa4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 TRIM14Q14142 442 aa4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 TNIP1Q15025 636 aa4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 PWP2Q15269 919 aaKnown RBP4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 HSP90AB3PQ58FF7 597 aa4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 TANGO2Q6ICL3 276 aa4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 RANBP10Q6VN20 620 aa4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 ZNF813Q6ZN06 617 aa4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 CACNA2D3Q8IZS8 1091 aa4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 ATG16L2Q8NAA4 619 aa4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 ZNF398Q8TD17 642 aa4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 SLC22A17Q8WUG5 538 aa4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 LRFN1Q9P244 771 aa4.99□□□□□ -1.61
PRPF4B-202ENST00000461612 RNF123Q5XPI4 1314 aa4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 UBR3Q6ZT12 1888 aa4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 MAP2P11137 1827 aaKnown RBP4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 CCDC187A0A096LP49 1063 aa4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 WIPF3A6NGB9 483 aa4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 MANSC4A6NHS7 340 aaPredicted RBP4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 ACKR2O00590 384 aa4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 LARGE1O95461 756 aa4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 TUBB4AP04350 444 aa4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 CYP2A6P11509 494 aaPredicted RBP4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 LBX1P52954 281 aa4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 WDR5P61964 334 aaKnown RBP4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 FOXF2Q12947 444 aa4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 CNGA3Q16281 694 aa4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 PFKFB3Q16875 520 aaPredicted RBP4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 GRAMD1BQ3KR37 738 aa4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 CRY2Q49AN0 593 aa4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 KLHL17Q6TDP4 642 aa4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 MCM10Q7L590 875 aa4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 CCDC117Q8IWD4 279 aaPredicted RBP4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 EXOC8Q8IYI6 725 aa4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 C8orf58Q8NAV2 365 aa4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 RTKNQ9BST9 563 aa4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 KRTAP4-5Q9BYR2 181 aa4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 AGO4Q9HCK5 861 aaKnown RBP4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 ADARB2Q9NS39 739 aaKnown RBP4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 BABAM1Q9NWV8 329 aa4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 SCAF8Q9UPN6 1271 aaKnown RBP4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 RRP7AQ9Y3A4 280 aaKnown RBP4.98□□□□□ -1.61
PRPF4B-202ENST00000461612 MAP3K15Q6ZN16 1313 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 ARHGEF17Q96PE2 2063 aaPredicted RBP4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 MRC1P22897 1456 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 LOC105369274A0A096LPK9 316 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 LOC102723532A0A0G2JNH3 316 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 FCHO1O14526 889 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 NKX2-8O15522 239 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 ACTL6BO94805 426 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 TNFRSF6BO95407 300 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 CER1O95813 267 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 SLC3A2P08195 630 aaKnown RBP4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 ALADP13716 330 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 KLRK1P26718 216 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 RAE1P78406 368 aaKnown RBP4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 LMOD3Q0VAK6 560 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 TMEM119Q4V9L6 283 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 GLE1Q53GS7 698 aaKnown RBP4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 ZNF569Q5MCW4 686 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 SLC10A5Q5PT55 438 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 DPY19L2P1Q6NXN4 242 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 SLC44A2Q8IWA5 706 aaPredicted RBP4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 OR4N4Q8N0Y3 316 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 NGEFQ8N5V2 710 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 TRAPPC12Q8WVT3 735 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 P2RY11Q96G91 374 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 REXO5Q96IC2 774 aaKnown RBP4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 CAPNS2Q96L46 248 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 UTP14AQ9BVJ6 771 aaKnown RBP4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 CDCP1Q9H5V8 836 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 VPS4AQ9UN37 437 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 PCDHB2Q9Y5E7 798 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 SIRT4Q9Y6E7 314 aaPredicted RBP4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 TAF1LQ8IZX4 1826 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 TUBGCP6Q96RT7 1819 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 TOGARAM1Q9Y4F4 1720 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 CDHR2Q9BYE9 1310 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 MAPK8IP3Q9UPT6 1336 aa4.97□□□□□ -1.61
PRPF4B-202ENST00000461612 RGPD2P0DJD1 1756 aa4.96□□□□□ -1.61
PRPF4B-202ENST00000461612 IBTKQ9P2D0 1353 aaPredicted RBP4.96□□□□□ -1.62
PRPF4B-202ENST00000461612 ITGB4P16144 1822 aa4.96□□□□□ -1.62
PRPF4B-202ENST00000461612 KIF20BQ96Q89 1820 aa4.96□□□□□ -1.62
PRPF4B-202ENST00000461612 FAM90A18PA6NE21 464 aa4.96□□□□□ -1.62
PRPF4B-202ENST00000461612 FAM90A16PA6NEW6 464 aa4.96□□□□□ -1.62
PRPF4B-202ENST00000461612 FAM90A9PA6NNJ1 464 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms