RNA–Protein interactions for RNA: ENST00000461612.1

PRPF4B-202, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-202ENST00000461612 AEBP2Q6ZN18 517 aaPredicted RBP22.32■■□□□ 1.16
PRPF4B-202ENST00000461612 CHIC1Q5VXU3 224 aa22.02■■□□□ 1.12
PRPF4B-202ENST00000461612 PHF23Q9BUL5 403 aaPredicted RBP19.33■□□□□ 0.68
PRPF4B-202ENST00000461612 SENP3Q9H4L4 574 aaPredicted RBP19.01■□□□□ 0.63
PRPF4B-202ENST00000461612 PLPPR3Q6T4P5 718 aa17.97■□□□□ 0.47
PRPF4B-202ENST00000461612 FOXD1Q16676 465 aa17.56■□□□□ 0.4
PRPF4B-202ENST00000461612 PPP6R1Q9UPN7 881 aa16.98■□□□□ 0.31
PRPF4B-202ENST00000461612 ADRA2BP18089 450 aa16.97■□□□□ 0.31
PRPF4B-202ENST00000461612 PIAS4Q8N2W9 510 aaPredicted RBP16.6■□□□□ 0.25
PRPF4B-202ENST00000461612 MSH5O43196 834 aa16.22■□□□□ 0.19
PRPF4B-202ENST00000461612 PPP4R3CPQ6ZMV5 832 aa15.82■□□□□ 0.12
PRPF4B-202ENST00000461612 SCAF1Q9H7N4 1312 aaKnown RBP15.67■□□□□ 0.1
PRPF4B-202ENST00000461612 KCNA4P22459 653 aa15.57■□□□□ 0.08
PRPF4B-202ENST00000461612 NCBP3Q53F19 620 aaKnown RBP15.51■□□□□ 0.07
PRPF4B-202ENST00000461612 CNKSR2Q8WXI2 1034 aa15.39■□□□□ 0.05
PRPF4B-202ENST00000461612 MAPK8IP2Q13387 824 aaPredicted RBP15.35■□□□□ 0.05
PRPF4B-202ENST00000461612 NPM3O75607 178 aaKnown RBP15.2■□□□□ 0.02
PRPF4B-202ENST00000461612 DMRT2Q9Y5R5 561 aa15.18■□□□□ 0.02
PRPF4B-202ENST00000461612 RNF216Q9NWF9 866 aaPredicted RBP15.04■□□□□ -0
PRPF4B-202ENST00000461612 HOXD11P31277 338 aaPredicted RBP14.94□□□□□ -0.02
PRPF4B-202ENST00000461612 SLC4A1APQ9BWU0 796 aaKnown RBP14.89□□□□□ -0.03
PRPF4B-202ENST00000461612 DNAJC5BQ9UF47 199 aa14.87□□□□□ -0.03
PRPF4B-202ENST00000461612 EHMT2Q96KQ7 1210 aa14.55□□□□□ -0.08
PRPF4B-202ENST00000461612 DCAF8L1A6NGE4 600 aa14.45□□□□□ -0.1
PRPF4B-202ENST00000461612 POTEDQ86YR6 584 aa14.43□□□□□ -0.1
PRPF4B-202ENST00000461612 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
PRPF4B-202ENST00000461612 FOXD4L1Q9NU39 408 aa14.35□□□□□ -0.11
PRPF4B-202ENST00000461612 SLC4A2P04920 1241 aa14.31□□□□□ -0.12
PRPF4B-202ENST00000461612 ZBTB22O15209 634 aa14.29□□□□□ -0.12
PRPF4B-202ENST00000461612 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.21□□□□□ -0.133e-9■□□□□ 9.6
PRPF4B-202ENST00000461612 MYCNP04198 464 aaPredicted RBP14.09□□□□□ -0.15
PRPF4B-202ENST00000461612 U3KPZ7 1027 aaPredicted RBP13.97□□□□□ -0.17
PRPF4B-202ENST00000461612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
PRPF4B-202ENST00000461612 HNRNPUL2Q1KMD3 747 aaKnown RBP13.95□□□□□ -0.18
PRPF4B-202ENST00000461612 ATXN8OSP0DMR3 200 aa13.9□□□□□ -0.18
PRPF4B-202ENST00000461612 SAMD1Q6SPF0 538 aaPredicted RBP13.89□□□□□ -0.19
PRPF4B-202ENST00000461612 RNF39Q9H2S5 420 aa13.86□□□□□ -0.19
PRPF4B-202ENST00000461612 APLP2Q06481 763 aa13.8□□□□□ -0.2
PRPF4B-202ENST00000461612 C1QBPQ07021 282 aaKnown RBP13.76□□□□□ -0.21
PRPF4B-202ENST00000461612 ATF5Q9Y2D1 282 aaPredicted RBP13.6□□□□□ -0.23
PRPF4B-202ENST00000461612 ZNF219Q9P2Y4 722 aaPredicted RBP13.52□□□□□ -0.25
PRPF4B-202ENST00000461612 SPINK5Q9NQ38 1064 aaPredicted RBP13.51□□□□□ -0.25
PRPF4B-202ENST00000461612 CAPN15O75808 1086 aa13.48□□□□□ -0.25
PRPF4B-202ENST00000461612 TRHP20396 242 aaPredicted RBP13.44□□□□□ -0.26
PRPF4B-202ENST00000461612 CACNB1Q02641 598 aaPredicted RBP13.39□□□□□ -0.27
PRPF4B-202ENST00000461612 POLA2Q14181 598 aa13.28□□□□□ -0.28
PRPF4B-202ENST00000461612 DSG3P32926 999 aa13.24□□□□□ -0.29
PRPF4B-202ENST00000461612 ABCB7O75027 752 aa13.19□□□□□ -0.3
PRPF4B-202ENST00000461612 ZBTB12Q9Y330 459 aaPredicted RBP13.15□□□□□ -0.3
PRPF4B-202ENST00000461612 FBLN2P98095 1184 aa13.13□□□□□ -0.31
PRPF4B-202ENST00000461612 MKRN4PQ13434 485 aaPredicted RBP13.05□□□□□ -0.32
PRPF4B-202ENST00000461612 FKBP8Q14318 412 aa12.99□□□□□ -0.33
PRPF4B-202ENST00000461612 SPDYE4A6NLX3 237 aa12.86□□□□□ -0.35
PRPF4B-202ENST00000461612 SPDYE2BA6NHP3 402 aa12.79□□□□□ -0.36
PRPF4B-202ENST00000461612 SPDYE6P0CI01 402 aa12.79□□□□□ -0.36
PRPF4B-202ENST00000461612 SPDYE2Q495Y8 402 aa12.79□□□□□ -0.36
PRPF4B-202ENST00000461612 OSCARQ8IYS5 282 aa12.78□□□□□ -0.36
PRPF4B-202ENST00000461612 ZNF692Q9BU19 519 aaPredicted RBP12.72□□□□□ -0.37
PRPF4B-202ENST00000461612 PROM2Q8N271 834 aa12.71□□□□□ -0.37
PRPF4B-202ENST00000461612 RBM42Q9BTD8 480 aaKnown RBP12.68□□□□□ -0.38
PRPF4B-202ENST00000461612 SSUH2Q9Y2M2 353 aa12.68□□□□□ -0.38
PRPF4B-202ENST00000461612 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
PRPF4B-202ENST00000461612 PABPN1Q86U42 306 aaKnown RBP eCLIP12.54□□□□□ -0.4
PRPF4B-202ENST00000461612 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
PRPF4B-202ENST00000461612 STAG3Q9UJ98 1225 aa12.46□□□□□ -0.41
PRPF4B-202ENST00000461612 REM2Q8IYK8 340 aaPredicted RBP12.37□□□□□ -0.43
PRPF4B-202ENST00000461612 SPDYE1Q8NFV5 336 aaPredicted RBP12.37□□□□□ -0.43
PRPF4B-202ENST00000461612 VASPP50552 380 aaPredicted RBP12.34□□□□□ -0.43
PRPF4B-202ENST00000461612 CLEC11AQ9Y240 323 aa12.24□□□□□ -0.45
PRPF4B-202ENST00000461612 PITPNM1O00562 1244 aa12.2□□□□□ -0.46
PRPF4B-202ENST00000461612 PRR29P0C7W0 189 aa12.2□□□□□ -0.46
PRPF4B-202ENST00000461612 PLEKHG5O94827 1062 aa12.19□□□□□ -0.46
PRPF4B-202ENST00000461612 MIER1Q8N108 512 aa12.19□□□□□ -0.46
PRPF4B-202ENST00000461612 PLCD3Q8N3E9 789 aa12.19□□□□□ -0.46
PRPF4B-202ENST00000461612 AMER1Q5JTC6 1135 aaPredicted RBP12.16□□□□□ -0.46
PRPF4B-202ENST00000461612 IFNLR1Q8IU57 520 aaPredicted RBP12.16□□□□□ -0.46
PRPF4B-202ENST00000461612 ZBTB47Q9UFB7 747 aaPredicted RBP12.12□□□□□ -0.47
PRPF4B-202ENST00000461612 KLHL34Q8N239 644 aa12.1□□□□□ -0.47
PRPF4B-202ENST00000461612 CREBZFQ9NS37 354 aa12.05□□□□□ -0.48
PRPF4B-202ENST00000461612 SPOCK2Q92563 424 aa12.04□□□□□ -0.48
PRPF4B-202ENST00000461612 RTN4Q9NQC3 1192 aaKnown RBP12.03□□□□□ -0.48
PRPF4B-202ENST00000461612 CHRDL2Q6WN34 429 aa12.02□□□□□ -0.49
PRPF4B-202ENST00000461612 FXR2P51116 673 aaKnown RBP eCLIP11.99□□□□□ -0.49
PRPF4B-202ENST00000461612 NPM1P06748 294 aaKnown RBP eCLIP11.93□□□□□ -0.5
PRPF4B-202ENST00000461612 MNX1P50219 401 aaPredicted RBP11.93□□□□□ -0.5
PRPF4B-202ENST00000461612 PRKAR2AP13861 404 aaKnown RBP11.91□□□□□ -0.5
PRPF4B-202ENST00000461612 CHADLQ6NUI6 762 aa11.9□□□□□ -0.5
PRPF4B-202ENST00000461612 PIP4P2Q8N4L2 257 aa11.89□□□□□ -0.51
PRPF4B-202ENST00000461612 NUBP1P53384 320 aa11.86□□□□□ -0.51
PRPF4B-202ENST00000461612 FARP1Q9Y4F1 1045 aaPredicted RBP11.86□□□□□ -0.51
PRPF4B-202ENST00000461612 GSE1Q14687 1217 aa11.83□□□□□ -0.52
PRPF4B-202ENST00000461612 PKD2Q13563 968 aa11.81□□□□□ -0.52
PRPF4B-202ENST00000461612 TRIM41Q8WV44 630 aa11.79□□□□□ -0.52
PRPF4B-202ENST00000461612 CIZ1Q9ULV3 898 aaPredicted RBP11.79□□□□□ -0.52
PRPF4B-202ENST00000461612 FAM212AQ96EL1 285 aa11.78□□□□□ -0.52
PRPF4B-202ENST00000461612 DCAF8Q5TAQ9 597 aa11.76□□□□□ -0.53
PRPF4B-202ENST00000461612 RASEFQ8IZ41 740 aa11.74□□□□□ -0.53
PRPF4B-202ENST00000461612 ECM2O94769 699 aaPredicted RBP11.73□□□□□ -0.53
PRPF4B-202ENST00000461612 PAK3O75914 559 aaPredicted RBP11.67□□□□□ -0.54
PRPF4B-202ENST00000461612 CHRM1P11229 460 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms