RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 KCTD6Q8NC69 237 aa23.05■■□□□ 1.28
C9orf3-209ENST00000460573 RPLP0P6Q8NHW5 317 aa23.05■■□□□ 1.28
C9orf3-209ENST00000460573 KIAA1524Q8TCG1 905 aa23.05■■□□□ 1.28
C9orf3-209ENST00000460573 FEM1AQ9BSK4 669 aa23.05■■□□□ 1.28
C9orf3-209ENST00000460573 MUC3BQ9H195 1237 aa23.05■■□□□ 1.28
C9orf3-209ENST00000460573 PCDH18Q9HCL0 1135 aa23.05■■□□□ 1.28
C9orf3-209ENST00000460573 DDX56Q9NY93 547 aaKnown RBP23.05■■□□□ 1.28
C9orf3-209ENST00000460573 CWC15Q9P013 229 aaKnown RBP23.05■■□□□ 1.28
C9orf3-209ENST00000460573 THAP10Q9P2Z0 257 aaPredicted RBP23.05■■□□□ 1.28
C9orf3-209ENST00000460573 INTS6Q9UL03 887 aaKnown RBP23.05■■□□□ 1.28
C9orf3-209ENST00000460573 MACROD2A1Z1Q3 448 aa23.04■■□□□ 1.28
C9orf3-209ENST00000460573 PSTPIP1O43586 416 aa23.04■■□□□ 1.28
C9orf3-209ENST00000460573 DLDP09622 509 aaKnown RBP23.04■■□□□ 1.28
C9orf3-209ENST00000460573 GOT1P17174 413 aa23.04■■□□□ 1.28
C9orf3-209ENST00000460573 DEKP35659 375 aaKnown RBP23.04■■□□□ 1.28
C9orf3-209ENST00000460573 GJC1P36383 396 aa23.04■■□□□ 1.28
C9orf3-209ENST00000460573 GAS6Q14393 721 aa23.04■■□□□ 1.28
C9orf3-209ENST00000460573 ZFYVE27Q5T4F4 411 aa23.04■■□□□ 1.28
C9orf3-209ENST00000460573 EMC10Q5UCC4 262 aa23.04■■□□□ 1.28
C9orf3-209ENST00000460573 SDE2Q6IQ49 451 aa23.04■■□□□ 1.28
C9orf3-209ENST00000460573 VSIG1Q86XK7 387 aa23.04■■□□□ 1.28
C9orf3-209ENST00000460573 IL17RCQ8NAC3 791 aa23.04■■□□□ 1.28
C9orf3-209ENST00000460573 KDM1BQ8NB78 822 aa23.04■■□□□ 1.28
C9orf3-209ENST00000460573 UBE2Q2Q8WVN8 375 aa23.04■■□□□ 1.28
C9orf3-209ENST00000460573 ALG14Q96F25 216 aa23.04■■□□□ 1.28
C9orf3-209ENST00000460573 MAGEH1Q9H213 219 aa23.04■■□□□ 1.28
C9orf3-209ENST00000460573 VPS28Q9UK41 221 aa23.04■■□□□ 1.28
C9orf3-209ENST00000460573 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.04■■□□□ 1.28
C9orf3-209ENST00000460573 OR51B4Q9Y5P0 310 aa23.04■■□□□ 1.28
C9orf3-209ENST00000460573 CHRM1P11229 460 aaPredicted RBP23.03■■□□□ 1.28
C9orf3-209ENST00000460573 MZF1P28698 734 aaPredicted RBP23.03■■□□□ 1.28
C9orf3-209ENST00000460573 NTSR1P30989 418 aa23.03■■□□□ 1.28
C9orf3-209ENST00000460573 ARSEP51690 589 aa23.03■■□□□ 1.28
C9orf3-209ENST00000460573 YBEYP58557 167 aaPredicted RBP23.03■■□□□ 1.28
C9orf3-209ENST00000460573 GNA12Q03113 381 aa23.03■■□□□ 1.28
C9orf3-209ENST00000460573 ATP13A4Q4VNC1 1196 aa23.03■■□□□ 1.28
C9orf3-209ENST00000460573 EOGTQ5NDL2 527 aa23.03■■□□□ 1.28
C9orf3-209ENST00000460573 SYT13Q7L8C5 426 aa23.03■■□□□ 1.28
C9orf3-209ENST00000460573 APCDD1Q8J025 514 aa23.03■■□□□ 1.28
C9orf3-209ENST00000460573 UMODL1-AS1Q8N2C9 162 aa23.03■■□□□ 1.28
C9orf3-209ENST00000460573 OR52K2Q8NGK3 314 aa23.03■■□□□ 1.28
C9orf3-209ENST00000460573 TSC1Q92574 1164 aa23.03■■□□□ 1.28
C9orf3-209ENST00000460573 ZNF670Q9BS34 389 aa23.03■■□□□ 1.28
C9orf3-209ENST00000460573 C2orf49Q9BVC5 232 aaPredicted RBP23.03■■□□□ 1.28
C9orf3-209ENST00000460573 DNAI1Q9UI46 699 aa23.03■■□□□ 1.28
C9orf3-209ENST00000460573 GMEB2Q9UKD1 530 aa23.03■■□□□ 1.28
C9orf3-209ENST00000460573 HCN2Q9UL51 889 aa23.03■■□□□ 1.28
C9orf3-209ENST00000460573 MMP17Q9ULZ9 603 aa23.03■■□□□ 1.28
C9orf3-209ENST00000460573 GUCA1BQ9UMX6 200 aa23.03■■□□□ 1.28
C9orf3-209ENST00000460573 SMG5Q9UPR3 1016 aaKnown RBP23.03■■□□□ 1.28
C9orf3-209ENST00000460573 PPP2R2CQ9Y2T4 447 aa23.03■■□□□ 1.28
C9orf3-209ENST00000460573 MYO15AQ9UKN7 3530 aa23.03■■□□□ 1.28
C9orf3-209ENST00000460573 A0A0U1RQJ8 604 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 CXorf51AA0A1B0GTR3 108 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 ZNF487B1APH4 448 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 RAMP2O60895 175 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 KLF8O95600 359 aaPredicted RBP23.02■■□□□ 1.28
C9orf3-209ENST00000460573 SRPRAP08240 638 aaKnown RBP23.02■■□□□ 1.28
C9orf3-209ENST00000460573 ERCC2P18074 760 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 KDELR1P24390 212 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 ID4P47928 161 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 ECT2LQ008S8 904 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 SATB1Q01826 763 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 DPYSQ14117 519 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 ODF2Q5BJF6 829 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 EGFLAMQ63HQ2 1017 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 PRR23BQ6ZRT6 265 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 CHPFQ8IZ52 775 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 LZTR1Q8N653 840 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 ALLCQ8N6M5 410 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 LRRC57Q8N9N7 239 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 DCAF4L2Q8NA75 395 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 CSPG4P5Q96PW8 444 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 KCNF1Q9H3M0 494 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 NDFIP2Q9NV92 336 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 TRIM10Q9UDY6 481 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 HYOU1Q9Y4L1 999 aa23.02■■□□□ 1.28
C9orf3-209ENST00000460573 GRID2IPA4D2P6 1211 aa23.01■■□□□ 1.27
C9orf3-209ENST00000460573 PAPSS2O95340 614 aaPredicted RBP23.01■■□□□ 1.27
C9orf3-209ENST00000460573 VASPP50552 380 aaPredicted RBP23.01■■□□□ 1.27
C9orf3-209ENST00000460573 NDST2P52849 883 aa23.01■■□□□ 1.27
C9orf3-209ENST00000460573 ST8SIA6P61647 398 aa23.01■■□□□ 1.27
C9orf3-209ENST00000460573 ENPP2Q13822 863 aa23.01■■□□□ 1.27
C9orf3-209ENST00000460573 DPYSL3Q14195 570 aa23.01■■□□□ 1.27
C9orf3-209ENST00000460573 POLD3Q15054 466 aaPredicted RBP23.01■■□□□ 1.27
C9orf3-209ENST00000460573 PARP15Q460N3 678 aa23.01■■□□□ 1.27
C9orf3-209ENST00000460573 TXNDC5Q8NBS9 432 aaKnown RBP23.01■■□□□ 1.27
C9orf3-209ENST00000460573 ZBTB44Q8NCP5 570 aa23.01■■□□□ 1.27
C9orf3-209ENST00000460573 ZNF830Q96NB3 372 aaPredicted RBP23.01■■□□□ 1.27
C9orf3-209ENST00000460573 GABRG3Q99928 467 aa23.01■■□□□ 1.27
C9orf3-209ENST00000460573 CALN1Q9BXU9 219 aa23.01■■□□□ 1.27
C9orf3-209ENST00000460573 GOLPH3Q9H4A6 298 aa23.01■■□□□ 1.27
C9orf3-209ENST00000460573 PRDM16Q9HAZ2 1276 aa23.01■■□□□ 1.27
C9orf3-209ENST00000460573 ERVW-1Q9UQF0 538 aa23.01■■□□□ 1.27
C9orf3-209ENST00000460573 A0A0D9SEW6 157 aa23■■□□□ 1.27
C9orf3-209ENST00000460573 PALMO75781 387 aa23■■□□□ 1.27
C9orf3-209ENST00000460573 IL4RP24394 825 aa23■■□□□ 1.27
C9orf3-209ENST00000460573 NNMTP40261 264 aa23■■□□□ 1.27
C9orf3-209ENST00000460573 ZNF234Q14588 700 aa23■■□□□ 1.27
C9orf3-209ENST00000460573 PTPRNQ16849 979 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms