RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 CFIP05156 583 aa19.18■□□□□ 0.66
USP39-209ENST00000458268 RPS14P62263 151 aaKnown RBP19.18■□□□□ 0.66
USP39-209ENST00000458268 ZNF33AQ06730 810 aa19.18■□□□□ 0.66
USP39-209ENST00000458268 MAMLD1Q13495 774 aa19.18■□□□□ 0.66
USP39-209ENST00000458268 TTC31Q49AM3 519 aaPredicted RBP19.18■□□□□ 0.66
USP39-209ENST00000458268 FAM72AQ5TYM5 149 aa19.18■□□□□ 0.66
USP39-209ENST00000458268 HGSNATQ68CP4 663 aa19.18■□□□□ 0.66
USP39-209ENST00000458268 FAM72DQ6L9T8 149 aa19.18■□□□□ 0.66
USP39-209ENST00000458268 LINGO4Q6UY18 593 aa19.18■□□□□ 0.66
USP39-209ENST00000458268 FAM72BQ86X60 149 aa19.18■□□□□ 0.66
USP39-209ENST00000458268 MMAAQ8IVH4 418 aaKnown RBP19.18■□□□□ 0.66
USP39-209ENST00000458268 STK40Q8N2I9 435 aa19.18■□□□□ 0.66
USP39-209ENST00000458268 RMDN1Q96DB5 314 aa19.18■□□□□ 0.66
USP39-209ENST00000458268 TBC1D31Q96DN5 1066 aa19.18■□□□□ 0.66
USP39-209ENST00000458268 IQCDQ96DY2 449 aa19.18■□□□□ 0.66
USP39-209ENST00000458268 C1orf74Q96LT6 269 aa19.18■□□□□ 0.66
USP39-209ENST00000458268 MIR1-1HGQ9H1L0 117 aa19.18■□□□□ 0.66
USP39-209ENST00000458268 ITM2CQ9NQX7 267 aa19.18■□□□□ 0.66
USP39-209ENST00000458268 GPATCH2LQ9NWQ4 482 aa19.18■□□□□ 0.66
USP39-209ENST00000458268 DNAI1Q9UI46 699 aa19.18■□□□□ 0.66
USP39-209ENST00000458268 NUMA1Q14980 2115 aa19.18■□□□□ 0.66
USP39-209ENST00000458268 ADAMTS9Q9P2N4 1935 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 FRYLO94915 3013 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 A0A0D9SEW6 157 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 FAM47DPA6NHR8 397 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 CBX4O00257 560 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 TPM1P09493 284 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 ZNF806P0C7X5 589 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 MAOBP27338 520 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 KRT83P78385 493 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 POM121L1PQ3SYA9 428 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 C5orf22Q49AR2 442 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 PPP1R15BQ5SWA1 713 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 SLC41A1Q8IVJ1 513 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 ATP11CQ8NB49 1132 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 CENPIQ92674 756 aaPredicted RBP19.17■□□□□ 0.66
USP39-209ENST00000458268 TRIM11Q96F44 468 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 VCPIP1Q96JH7 1222 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 C2orf49Q9BVC5 232 aaPredicted RBP19.17■□□□□ 0.66
USP39-209ENST00000458268 TRIM7Q9C029 511 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 ATP13A1Q9HD20 1204 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 USP36Q9P275 1121 aaKnown RBP19.17■□□□□ 0.66
USP39-209ENST00000458268 PCSK1NQ9UHG2 260 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 VPS51Q9UID3 782 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 TBC1D30Q9Y2I9 924 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 BZW2Q9Y6E2 419 aaKnown RBP19.17■□□□□ 0.66
USP39-209ENST00000458268 SCINQ9Y6U3 715 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 ITIH6Q6UXX5 1313 aa19.17■□□□□ 0.66
USP39-209ENST00000458268 KHNYNO15037 678 aaKnown RBP19.16■□□□□ 0.66
USP39-209ENST00000458268 MID1O15344 667 aa19.16■□□□□ 0.66
USP39-209ENST00000458268 LRIG2O94898 1065 aa19.16■□□□□ 0.66
USP39-209ENST00000458268 IL1BP01584 269 aa19.16■□□□□ 0.66
USP39-209ENST00000458268 GZMAP12544 262 aa19.16■□□□□ 0.66
USP39-209ENST00000458268 GLDCP23378 1020 aa19.16■□□□□ 0.66
USP39-209ENST00000458268 PLK1P53350 603 aa19.16■□□□□ 0.66
USP39-209ENST00000458268 TRIM61Q5EBN2 209 aa19.16■□□□□ 0.66
USP39-209ENST00000458268 ACBD5Q5T8D3 534 aaPredicted RBP19.16■□□□□ 0.66
USP39-209ENST00000458268 SPECC1LQ69YQ0 1117 aa19.16■□□□□ 0.66
USP39-209ENST00000458268 IL31Q6EBC2 164 aa19.16■□□□□ 0.66
USP39-209ENST00000458268 PLEKHA7Q6IQ23 1121 aa19.16■□□□□ 0.66
USP39-209ENST00000458268 Q6ZVU0 165 aa19.16■□□□□ 0.66
USP39-209ENST00000458268 SETD3Q86TU7 594 aaPredicted RBP19.16■□□□□ 0.66
USP39-209ENST00000458268 ALG14Q96F25 216 aa19.16■□□□□ 0.66
USP39-209ENST00000458268 PSMB7Q99436 277 aa19.16■□□□□ 0.66
USP39-209ENST00000458268 FBRSQ9HAH7 460 aa19.16■□□□□ 0.66
USP39-209ENST00000458268 RXFP3Q9NSD7 469 aa19.16■□□□□ 0.66
USP39-209ENST00000458268 TMEM74BQ9NUR3 256 aa19.16■□□□□ 0.66
USP39-209ENST00000458268 WSB2Q9NYS7 404 aaPredicted RBP19.16■□□□□ 0.66
USP39-209ENST00000458268 NCKAP1Q9Y2A7 1128 aa19.16■□□□□ 0.66
USP39-209ENST00000458268 CFAP54Q96N23 3096 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 IGLV3-10A0A075B6K4 115 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 PRR5-ARHGAP8B1AHC4 643 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 RNASEH2AO75792 299 aaKnown RBP19.15■□□□□ 0.66
USP39-209ENST00000458268 OXTRP30559 389 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 ARHGAP8P85298 464 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 DLG2Q15700 870 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 CST6Q15828 149 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 TSR1Q2NL82 804 aaKnown RBP19.15■□□□□ 0.66
USP39-209ENST00000458268 PLA2G2CQ5R387 149 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 CCDC122Q5T0U0 273 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 C9orf64Q5T6V5 341 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 LEKR1Q6ZMV7 388 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 SYT12Q8IV01 421 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 SYN2Q92777 582 aaPredicted RBP19.15■□□□□ 0.66
USP39-209ENST00000458268 PTPRN2Q92932 1015 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 NTAN1Q96AB6 310 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 OMDQ99983 421 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 EDEM2Q9BV94 578 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 TRIM5Q9C035 493 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 OSBPL2Q9H1P3 480 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 RSPH9Q9H1X1 276 aaPredicted RBP19.15■□□□□ 0.66
USP39-209ENST00000458268 DEF6Q9H4E7 631 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 FSCN3Q9NQT6 498 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 FZD10Q9ULW2 581 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 OR51B4Q9Y5P0 310 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 PI4KAP42356 2102 aa19.15■□□□□ 0.66
USP39-209ENST00000458268 A0A087X0T9 212 aa19.14■□□□□ 0.65
USP39-209ENST00000458268 A0A1W2PP55 124 aa19.14■□□□□ 0.65
USP39-209ENST00000458268 TARSL2A2RTX5 802 aaKnown RBP19.14■□□□□ 0.65
USP39-209ENST00000458268 K7ERQ8 282 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms