RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 ELP4Q96EB1 424 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 RNFT2Q96EX2 444 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 P2RY11Q96G91 374 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 MMS19Q96T76 1030 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 CLSTN3Q9BQT9 956 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 CHCHD6Q9BRQ6 235 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 GATA5Q9BWX5 397 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 CIPCQ9C0C6 399 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 MMRN2Q9H8L6 949 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 SFXN1Q9H9B4 322 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 BEX4Q9NWD9 120 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 PPP1R14DQ9NXH3 145 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 LRIT1Q9P2V4 623 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 KLQ9UEF7 1012 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 NAALADL1Q9UQQ1 740 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 REXO2Q9Y3B8 237 aaKnown RBP4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 SPATA31A5Q5VU36 1347 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 SPATA31A6Q5VVP1 1343 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 SPATA31A7Q8IWB4 1347 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 CFTRP13569 1480 aa4.11□□□□□ -1.75
HMGB1P15-201ENST00000453854 WDR97A6NE52 1622 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 PPRC1Q5VV67 1664 aaKnown RBP4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 TCRBV5S1A1TA0A578 114 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 C16orf96A6NNT2 1141 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 H7C1Q1 480 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 CLIC1O00299 241 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 NARSO43776 548 aaKnown RBP4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 WEE2P0C1S8 567 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 LYL1P12980 280 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 MAKP20794 623 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 PSMA3P25788 255 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 UBA7P41226 1012 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 STAT1P42224 750 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 RARRES1P49788 294 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 CCR9P51686 369 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 RPS6KA3P51812 740 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 RPP30P78346 268 aaKnown RBP4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 B4GALNT1Q00973 533 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 ALKBH1Q13686 389 aaKnown RBP4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 MFSD13AQ14CX5 517 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 CNGA3Q16281 694 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 NFIL3Q16649 462 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 ZNF766Q5HY98 468 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 MFSD4BQ5TF39 518 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 TMCO3Q6UWJ1 677 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 Q6ZPA2 131 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 TMTC3Q6ZXV5 915 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 RTL10Q7L3V2 364 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 VRK3Q8IV63 474 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 SCN4BQ8IWT1 228 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 ULK2Q8IYT8 1036 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 NDUFAF2Q8N183 169 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 ZNF366Q8N895 744 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 RFWD2Q8NHY2 731 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 NFKBIDQ8NI38 313 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 RSPH1Q8WYR4 309 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 VMP1Q96GC9 406 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 HIC2Q96JB3 615 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 TIGD1Q96MW7 591 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 ZMAT2Q96NC0 199 aaKnown RBP4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 TSPAN18Q96SJ8 248 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 CD180Q99467 661 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 MACROD1Q9BQ69 325 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 ADGRE3Q9BY15 652 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 ZNF341Q9BYN7 854 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 INTS2Q9H0H0 1204 aaKnown RBP4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 CYP4F11Q9HBI6 524 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 ZCCHC17Q9NP64 241 aaKnown RBP4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 SEMA4BQ9NPR2 832 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 ZDHHC7Q9NXF8 308 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 TFCP2L1Q9NZI6 479 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 HCN3Q9P1Z3 774 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 TBC1D14Q9P2M4 693 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 ORC3Q9UBD5 711 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 SUFUQ9UMX1 484 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 SIRT4Q9Y6E7 314 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 KDM3AQ9Y4C1 1321 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 KIF21BO75037 1637 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 TOP2BQ02880 1626 aa4.1□□□□□ -1.75
HMGB1P15-201ENST00000453854 FSD2A1L4K1 749 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 C17orf100A8MU93 164 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 TEX22C9J3V5 150 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 BTBD19C9JJ37 291 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 TNPO2O14787 897 aaKnown RBP4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 TIPRLO75663 272 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 CNTN5O94779 1100 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 ADH4P08319 380 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 GLULP15104 373 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 HOXB9P17482 250 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 CHMP24386 653 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 PRKCHP24723 683 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 PSMA4P25789 261 aaKnown RBP4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 EPHA8P29322 1005 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 CTNNA1P35221 906 aaKnown RBP4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 HNF1BP35680 557 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 MMP14P50281 582 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 ADPRHP54922 357 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 SOX10P56693 466 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 SIM1P81133 766 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 SHC2P98077 582 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms