RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 ETNK1Q9HBU6 452 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 IGSF9Q9P2J2 1179 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 DPP7Q9UHL4 492 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 HPCAL4Q9UM19 191 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 ARHGAP26Q9UNA1 814 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 SHOC2Q9UQ13 582 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 CCL26Q9Y258 94 aa6.15□□□□□ -1.42
SDC4P-201ENST00000453285 ZFP37Q9Y6Q3 630 aaPredicted RBP6.15□□□□□ -1.42
SDC4P-201ENST00000453285 E2F8A0AVK6 867 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 E7ESA3 106 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 J3KR12 359 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 AGPSO00116 658 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 SMAPO00193 183 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 DFFAO00273 331 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 ZNF197O14709 1029 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 SCAMP3O14828 347 aaKnown RBP6.14□□□□□ -1.43
SDC4P-201ENST00000453285 MATN3O15232 486 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 CHADO15335 359 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 LINC01565O15544 149 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 ZBTB24O43167 697 aaPredicted RBP6.14□□□□□ -1.43
SDC4P-201ENST00000453285 MTSS1O43312 755 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 TSPAN3O60637 253 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 OPHN1O60890 802 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 CLDN11O75508 207 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 ZNF189O75820 626 aaPredicted RBP6.14□□□□□ -1.43
SDC4P-201ENST00000453285 JCHAINP01591 159 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 CKMP06732 381 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 CEBPBP17676 345 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 TPSB2P20231 275 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 WEE1P30291 646 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 OR1E1P30953 314 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 ACVRL1P37023 503 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 HSD17B3P37058 310 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 FDFT1P37268 417 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 TNNT3P45378 269 aaPredicted RBP6.14□□□□□ -1.43
SDC4P-201ENST00000453285 CDH4P55283 916 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 IFI35P80217 286 aaPredicted RBP6.14□□□□□ -1.43
SDC4P-201ENST00000453285 TNK2Q07912 1038 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 HYAL1Q12794 435 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 SERINC3Q13530 473 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 SEMA5AQ13591 1074 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 TPSAB1Q15661 275 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 PARP6Q2NL67 630 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 MSS51Q4VC12 460 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 TEX44Q53QW1 395 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 ARHGAP15Q53QZ3 475 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 SPDYCQ5MJ68 293 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 RABGAP1LQ5R372 815 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 FNBP1LQ5T0N5 605 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 FAXCQ5TGI0 409 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 RNF43Q68DV7 783 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 CXorf57Q6NSI4 855 aaKnown RBP6.14□□□□□ -1.43
SDC4P-201ENST00000453285 SYCE2Q6PIF2 218 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 TMC5Q6UXY8 1006 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 ZNF534Q76KX8 674 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 CHST9Q7L1S5 443 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 PID1Q7Z2X4 250 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 RELL1Q8IUW5 271 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 LRRC49Q8IUZ0 686 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 BBS7Q8IWZ6 715 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 AGGF1Q8N302 714 aaeCLIP6.14□□□□□ -1.43
SDC4P-201ENST00000453285 SH3RF2Q8TEC5 729 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 SMG7Q92540 1137 aaKnown RBP6.14□□□□□ -1.43
SDC4P-201ENST00000453285 ARHGEF2Q92974 986 aaKnown RBP6.14□□□□□ -1.43
SDC4P-201ENST00000453285 ALG14Q96F25 216 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 HMCESQ96FZ2 354 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 TEKT5Q96M29 485 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 VAT1Q99536 393 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 DDX50Q9BQ39 737 aaKnown RBP6.14□□□□□ -1.43
SDC4P-201ENST00000453285 CEP41Q9BYV8 373 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 MAGEH1Q9H213 219 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 SEMA4AQ9H3S1 761 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 NSUN3Q9H649 340 aaKnown RBP6.14□□□□□ -1.43
SDC4P-201ENST00000453285 SFXN1Q9H9B4 322 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 VIPAS39Q9H9C1 493 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 RAB6BQ9NRW1 208 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 DONSONQ9NYP3 566 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 CFAP97Q9P2B7 532 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 MTRF1LQ9UGC7 380 aaKnown RBP6.14□□□□□ -1.43
SDC4P-201ENST00000453285 IPO11Q9UI26 975 aaKnown RBP6.14□□□□□ -1.43
SDC4P-201ENST00000453285 ZNF510Q9Y2H8 683 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 TBC1D30Q9Y2I9 924 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 ATP8A1Q9Y2Q0 1164 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 NFS1Q9Y697 457 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 TCF20Q9UGU0 1960 aaKnown RBP6.14□□□□□ -1.43
SDC4P-201ENST00000453285 CDH23Q9H251 3354 aa6.14□□□□□ -1.43
SDC4P-201ENST00000453285 TICRRQ7Z2Z1 1910 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 A0A0D9SEW6 157 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 A0A1B0GVM2 712 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 ILVBLA1L0T0 632 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 TCAF2A6NFQ2 919 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 ARHGAP42A6NI28 874 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 GOLGA8MH3BSY2 632 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 NDC80O14777 642 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 ALOX15BO15296 676 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 PRAMEF11O60813 436 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 RAMP2O60895 175 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 TBL1XO60907 577 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 PRAMEF12O95522 483 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 CCNB1P14635 433 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms