RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 LAMA5O15230 3695 aa27.92■■■□□ 2.06
USP42-204ENST00000451154 DOCK9Q9BZ29 2069 aa27.91■■■□□ 2.06
USP42-204ENST00000451154 TP53BP1Q12888 1972 aaPredicted RBP27.91■■■□□ 2.06
USP42-204ENST00000451154 NYNRINQ9P2P1 1898 aaKnown RBP27.91■■■□□ 2.06
USP42-204ENST00000451154 TBC1D3DA0A087WVF3 549 aa27.91■■■□□ 2.06
USP42-204ENST00000451154 TBC1D3IA0A087WXS9 549 aa27.91■■■□□ 2.06
USP42-204ENST00000451154 TBC1D3EA0A087X179 549 aa27.91■■■□□ 2.06
USP42-204ENST00000451154 TBC1D3KA0A087X1G2 549 aa27.91■■■□□ 2.06
USP42-204ENST00000451154 TBC1D3FA6NER0 549 aaPredicted RBP27.91■■■□□ 2.06
USP42-204ENST00000451154 C10orf142B7Z368 130 aa27.91■■■□□ 2.06
USP42-204ENST00000451154 TBC1D3LB9A6J9 549 aa27.91■■■□□ 2.06
USP42-204ENST00000451154 PAGE1O75459 146 aa27.91■■■□□ 2.06
USP42-204ENST00000451154 DAB1O75553 588 aa27.91■■■□□ 2.06
USP42-204ENST00000451154 TBC1D3HP0C7X1 549 aa27.91■■■□□ 2.06
USP42-204ENST00000451154 NOS2P35228 1153 aa27.91■■■□□ 2.06
USP42-204ENST00000451154 GRK6P43250 576 aa27.91■■■□□ 2.06
USP42-204ENST00000451154 CCR5P51681 352 aa27.91■■■□□ 2.06
USP42-204ENST00000451154 TBC1D3GQ6DHY5 549 aa27.91■■■□□ 2.06
USP42-204ENST00000451154 TBC1D3CQ6IPX1 549 aa27.91■■■□□ 2.06
USP42-204ENST00000451154 SLC26A9Q7LBE3 791 aa27.91■■■□□ 2.06
USP42-204ENST00000451154 FAM71AQ8IYT1 594 aa27.91■■■□□ 2.06
USP42-204ENST00000451154 TBC1D3Q8IZP1 549 aaPredicted RBP27.91■■■□□ 2.06
USP42-204ENST00000451154 NDST4Q9H3R1 872 aa27.91■■■□□ 2.06
USP42-204ENST00000451154 KNTC1P50748 2209 aa27.9■■■□□ 2.06
USP42-204ENST00000451154 FAM170AA1A519 330 aa27.9■■■□□ 2.06
USP42-204ENST00000451154 TFE3P19532 575 aaPredicted RBP27.9■■■□□ 2.06
USP42-204ENST00000451154 DRD3P35462 400 aa27.9■■■□□ 2.06
USP42-204ENST00000451154 VWA3BQ502W6 1294 aa27.9■■■□□ 2.06
USP42-204ENST00000451154 MIIPQ5JXC2 388 aa27.9■■■□□ 2.06
USP42-204ENST00000451154 MARCH9Q86YJ5 346 aa27.9■■■□□ 2.06
USP42-204ENST00000451154 SPAG5Q96R06 1193 aa27.9■■■□□ 2.06
USP42-204ENST00000451154 PPP1R9BQ96SB3 815 aa27.9■■■□□ 2.06
USP42-204ENST00000451154 PIGVQ9NUD9 493 aa27.9■■■□□ 2.06
USP42-204ENST00000451154 SARDHQ9UL12 918 aa27.9■■■□□ 2.06
USP42-204ENST00000451154 OR51B4Q9Y5P0 310 aa27.9■■■□□ 2.06
USP42-204ENST00000451154 A0A1B0GTQ1 180 aa27.89■■■□□ 2.06
USP42-204ENST00000451154 A0A1W2PR77 199 aa27.89■■■□□ 2.06
USP42-204ENST00000451154 TNFSF14O43557 240 aa27.89■■■□□ 2.06
USP42-204ENST00000451154 DFNA5O60443 496 aa27.89■■■□□ 2.06
USP42-204ENST00000451154 DKK1O94907 266 aa27.89■■■□□ 2.06
USP42-204ENST00000451154 ADCY5O95622 1261 aa27.89■■■□□ 2.06
USP42-204ENST00000451154 PRKCSHP14314 528 aaPredicted RBP27.89■■■□□ 2.06
USP42-204ENST00000451154 CD38P28907 300 aa27.89■■■□□ 2.06
USP42-204ENST00000451154 DLG2Q15700 870 aa27.89■■■□□ 2.06
USP42-204ENST00000451154 CCDC157Q569K6 752 aa27.89■■■□□ 2.06
USP42-204ENST00000451154 OTUD1Q5VV17 481 aaPredicted RBP27.89■■■□□ 2.06
USP42-204ENST00000451154 TMPRSS7Q7RTY8 843 aa27.89■■■□□ 2.06
USP42-204ENST00000451154 FAM114A1Q8IWE2 563 aa27.89■■■□□ 2.06
USP42-204ENST00000451154 ZNF397Q8NF99 534 aaPredicted RBP27.89■■■□□ 2.06
USP42-204ENST00000451154 SKA1Q96BD8 255 aa27.89■■■□□ 2.06
USP42-204ENST00000451154 SERAC1Q96JX3 654 aa27.89■■■□□ 2.06
USP42-204ENST00000451154 TUBGCP2Q9BSJ2 902 aa27.89■■■□□ 2.06
USP42-204ENST00000451154 PDCL3Q9H2J4 239 aa27.89■■■□□ 2.06
USP42-204ENST00000451154 CLSTN2Q9H4D0 955 aa27.89■■■□□ 2.06
USP42-204ENST00000451154 ANLNQ9NQW6 1124 aa27.89■■■□□ 2.06
USP42-204ENST00000451154 SLC25A13Q9UJS0 675 aa27.89■■■□□ 2.06
USP42-204ENST00000451154 SNX10Q9Y5X0 201 aa27.89■■■□□ 2.06
USP42-204ENST00000451154 ACACAQ13085 2346 aa27.89■■■□□ 2.05
USP42-204ENST00000451154 ATP9BO43861 1147 aa27.88■■■□□ 2.05
USP42-204ENST00000451154 RTN2O75298 545 aa27.88■■■□□ 2.05
USP42-204ENST00000451154 CNTN5O94779 1100 aa27.88■■■□□ 2.05
USP42-204ENST00000451154 BPIFB4P59827 614 aa27.88■■■□□ 2.05
USP42-204ENST00000451154 PPP2CBP62714 309 aa27.88■■■□□ 2.05
USP42-204ENST00000451154 PPP2CAP67775 309 aa27.88■■■□□ 2.05
USP42-204ENST00000451154 RAPGEF1Q13905 1077 aa27.88■■■□□ 2.05
USP42-204ENST00000451154 DRAP1Q14919 205 aaPredicted RBP27.88■■■□□ 2.05
USP42-204ENST00000451154 DPCR1Q3MIW9 517 aa27.88■■■□□ 2.05
USP42-204ENST00000451154 POM121L1PQ3SYA9 428 aa27.88■■■□□ 2.05
USP42-204ENST00000451154 SMYD5Q6GMV2 418 aa27.88■■■□□ 2.05
USP42-204ENST00000451154 PROSER1Q86XN7 944 aa27.88■■■□□ 2.05
USP42-204ENST00000451154 GATAD2AQ86YP4 633 aa27.88■■■□□ 2.05
USP42-204ENST00000451154 OR8D1Q8WZ84 308 aa27.88■■■□□ 2.05
USP42-204ENST00000451154 NPY6RQ99463 290 aa27.88■■■□□ 2.05
USP42-204ENST00000451154 ELF4Q99607 663 aaPredicted RBP27.88■■■□□ 2.05
USP42-204ENST00000451154 TKTL2Q9H0I9 626 aa27.88■■■□□ 2.05
USP42-204ENST00000451154 WDCPQ9H6R7 721 aa27.88■■■□□ 2.05
USP42-204ENST00000451154 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.88■■■□□ 2.05
USP42-204ENST00000451154 VPS28Q9UK41 221 aa27.88■■■□□ 2.05
USP42-204ENST00000451154 CLDN11O75508 207 aa27.87■■■□□ 2.05
USP42-204ENST00000451154 VASPP50552 380 aaPredicted RBP27.87■■■□□ 2.05
USP42-204ENST00000451154 KCNMA1Q12791 1236 aa27.87■■■□□ 2.05
USP42-204ENST00000451154 MTA1Q13330 715 aa27.87■■■□□ 2.05
USP42-204ENST00000451154 C5orf22Q49AR2 442 aa27.87■■■□□ 2.05
USP42-204ENST00000451154 TMEM35BQ8NCS4 154 aa27.87■■■□□ 2.05
USP42-204ENST00000451154 TBC1D30Q9Y2I9 924 aa27.87■■■□□ 2.05
USP42-204ENST00000451154 I6L893 689 aaPredicted RBP27.86■■■□□ 2.05
USP42-204ENST00000451154 BNIP3LO60238 219 aa27.86■■■□□ 2.05
USP42-204ENST00000451154 CXCR3P49682 368 aa27.86■■■□□ 2.05
USP42-204ENST00000451154 CDH4P55283 916 aa27.86■■■□□ 2.05
USP42-204ENST00000451154 SHBQ15464 509 aa27.86■■■□□ 2.05
USP42-204ENST00000451154 ALFQ53S48 1182 aa27.86■■■□□ 2.05
USP42-204ENST00000451154 TAF3Q5VWG9 929 aa27.86■■■□□ 2.05
USP42-204ENST00000451154 Q6ZVU0 165 aa27.86■■■□□ 2.05
USP42-204ENST00000451154 DSG4Q86SJ6 1040 aa27.86■■■□□ 2.05
USP42-204ENST00000451154 ZDHHC17Q8IUH5 632 aa27.86■■■□□ 2.05
USP42-204ENST00000451154 MUC3BQ9H195 1237 aa27.86■■■□□ 2.05
USP42-204ENST00000451154 CCDC86Q9H6F5 360 aaKnown RBP27.86■■■□□ 2.05
USP42-204ENST00000451154 ARHGEF38Q9NXL2 777 aa27.86■■■□□ 2.05
USP42-204ENST00000451154 RRN3Q9NYV6 651 aa27.86■■■□□ 2.05
USP42-204ENST00000451154 CHMP5Q9NZZ3 219 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms