RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 FAM129BQ96TA1 746 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 C11orf70Q9BRQ4 267 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 NEUROG2Q9H2A3 272 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 ANLNQ9NQW6 1124 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 FZD4Q9ULV1 537 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 TBC1D30Q9Y2I9 924 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 SNX10Q9Y5X0 201 aa15.7■□□□□ 0.1
CHD3-205ENST00000449744 ASCC3Q8N3C0 2202 aaKnown RBP15.7■□□□□ 0.1
CHD3-205ENST00000449744 A0A1B0GVT2 93 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 SRGAP2O75044 1071 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 CNTN5O94779 1100 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 CD59P13987 128 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 CHRNB2P17787 502 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 CD27P26842 260 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 NSFP46459 744 aaKnown RBP15.69■□□□□ 0.1
CHD3-205ENST00000449744 CSNK1EP49674 416 aaKnown RBP15.69■□□□□ 0.1
CHD3-205ENST00000449744 VASPP50552 380 aaPredicted RBP15.69■□□□□ 0.1
CHD3-205ENST00000449744 GALCP54803 685 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 SHC2P98077 582 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 ATP11AP98196 1134 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 ALFQ53S48 1182 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 C6orf118Q5T5N4 469 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 TRNP1Q6NT89 227 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 ADAT2Q7Z6V5 191 aaKnown RBP15.69■□□□□ 0.1
CHD3-205ENST00000449744 PHLDB2Q86SQ0 1253 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 SETD3Q86TU7 594 aaPredicted RBP15.69■□□□□ 0.1
CHD3-205ENST00000449744 FAM131BQ86XD5 332 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 EMC1Q8N766 993 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 OR52K2Q8NGK3 314 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 SLC30A5Q8TAD4 765 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 HAPLN3Q96S86 360 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 C2orf49Q9BVC5 232 aaPredicted RBP15.69■□□□□ 0.1
CHD3-205ENST00000449744 GAREM1Q9H706 876 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 TM9SF3Q9HD45 589 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 OSGEPQ9NPF4 335 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 SEPT11Q9NVA2 429 aaKnown RBP15.69■□□□□ 0.1
CHD3-205ENST00000449744 SERGEFQ9UGK8 458 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 PCDHB9Q9Y5E1 797 aa15.69■□□□□ 0.1
CHD3-205ENST00000449744 LRRC10BA6NIK2 292 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 DRGXA6NNA5 263 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 E9PAM4 449 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 I6L893 689 aaPredicted RBP15.68■□□□□ 0.1
CHD3-205ENST00000449744 ATP9BO43861 1147 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 BNIP3LO60238 219 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 GJB3O75712 270 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 VAV1P15498 845 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 GOT1P17174 413 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 SDC4P31431 198 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 SIM1P81133 766 aaPredicted RBP15.68■□□□□ 0.1
CHD3-205ENST00000449744 NCAPHQ15003 741 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 DLG2Q15700 870 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 CDO1Q16878 200 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 ARL13BQ3SXY8 428 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 FAM46CQ5VWP2 391 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 NCEH1Q6PIU2 408 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 OR2T34Q8NGX1 318 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 OR14C36Q8NHC7 312 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 C1orf216Q8TAB5 229 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 FRS2Q8WU20 508 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 RXFP2Q8WXD0 754 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 ERGIC2Q96RQ1 377 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 TMPRSS4Q9NRS4 437 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 MPP6Q9NZW5 540 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 TMEM63CQ9P1W3 806 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 ADAMTS1Q9UHI8 967 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 FARP1Q9Y4F1 1045 aaPredicted RBP15.68■□□□□ 0.1
CHD3-205ENST00000449744 OR51B4Q9Y5P0 310 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 NUMA1Q14980 2115 aa15.68■□□□□ 0.1
CHD3-205ENST00000449744 CHD8Q9HCK8 2581 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 MAP1BP46821 2468 aaKnown RBP15.67■□□□□ 0.1
CHD3-205ENST00000449744 SPAARA0A1B0GVQ0 90 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 SMTNL1A8MU46 457 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 C1QTNF3-AMACRE9PGA6 284 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 SH3BP5O60239 455 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 CALB1P05937 261 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 CCDC172P0C7W6 258 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 UNGP13051 313 aaPredicted RBP15.67■□□□□ 0.1
CHD3-205ENST00000449744 OR1E1P30953 314 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 GRIA4P48058 902 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 HLA-BQ31612 363 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 ANO6Q4KMQ2 910 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.67■□□□□ 0.1
CHD3-205ENST00000449744 BNIPLQ7Z465 357 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 TFAP2DQ7Z6R9 452 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 NAXDQ8IW45 347 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 ZNF683Q8IZ20 524 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 SH2D3CQ8N5H7 860 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 AADATQ8N5Z0 425 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 ATP11CQ8NB49 1132 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 CCDC114Q96M63 670 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 SELENOOQ9BVL4 669 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 ZYG11BQ9C0D3 744 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 ADAM22Q9P0K1 906 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 SLCO1B1Q9Y6L6 691 aa15.67■□□□□ 0.1
CHD3-205ENST00000449744 CACNA1EQ15878 2313 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 IGLV3-10A0A075B6K4 115 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 TBC1D3DA0A087WVF3 549 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 TBC1D3IA0A087WXS9 549 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 TBC1D3EA0A087X179 549 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 TBC1D3KA0A087X1G2 549 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms