RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 PABPN1LA6NDY0 278 aaKnown RBP12.63□□□□□ -0.39
UBE3B-204ENST00000449510 MYO1GB0I1T2 1018 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 PSMD12O00232 456 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-204ENST00000449510 ADSLP30566 484 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-204ENST00000449510 HADHAP40939 763 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 CCNG1P51959 295 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 KPNA2P52292 529 aaKnown RBP12.63□□□□□ -0.39
UBE3B-204ENST00000449510 MAPRE2Q15555 327 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 C11orf91Q3C1V1 193 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 PAN2Q504Q3 1202 aaKnown RBP12.63□□□□□ -0.39
UBE3B-204ENST00000449510 C6orf183Q5T699 404 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 ZNF618Q5T7W0 954 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 CBR4Q8N4T8 237 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 DCBLD1Q8N8Z6 715 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 FRMD8Q9BZ67 464 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-204ENST00000449510 SOX17Q9H6I2 414 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-204ENST00000449510 SH3BP1Q9Y3L3 701 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 TRIM43BA6NCK2 446 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 KCNH1O95259 989 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 VDRP11473 427 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 UGT1A6P19224 532 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 CRABP2P29373 138 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 ALDH4A1P30038 563 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 MTTPP55157 894 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 PRKAA1Q13131 559 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 CAPSQ13938 189 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 CCNIQ14094 377 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 IMPG1Q17R60 797 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 KIZQ2M2Z5 673 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 TBC1D25Q3MII6 688 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 SH3D19Q5HYK7 790 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 DACT2Q5SW24 774 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 SETD3Q86TU7 594 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-204ENST00000449510 SPPL2CQ8IUH8 684 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 CDH19Q9H159 772 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 PCDH18Q9HCL0 1135 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 DPP3Q9NY33 737 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 ANGPTL3Q9Y5C1 460 aa12.63□□□□□ -0.39
UBE3B-204ENST00000449510 A0A087WXM4 84 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 LTFP02788 710 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 ZBTB48P10074 688 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-204ENST00000449510 ACO1P21399 889 aaKnown RBP12.62□□□□□ -0.39
UBE3B-204ENST00000449510 FUT4P22083 530 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 ZNF143P52747 638 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-204ENST00000449510 ARPP19P56211 112 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 TGFB2P61812 414 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 ARL13BQ3SXY8 428 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 ZNF470Q6ECI4 717 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 ANGPTL8Q6UXH0 198 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 C12orf56Q8IXR9 622 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 SAMD3Q8N6K7 520 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 PCDH19Q8TAB3 1148 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 ABHD8Q96I13 439 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 NACA2Q9H009 215 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 POMKQ9H5K3 350 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 MRPL40Q9NQ50 206 aaKnown RBP12.62□□□□□ -0.39
UBE3B-204ENST00000449510 CRYL1Q9Y2S2 319 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 UBIAD1Q9Y5Z9 338 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 NRP2O60462 931 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 FASP25445 335 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 NFYCQ13952 458 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 OGFOD2Q6N063 350 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 ZFP1Q6P2D0 407 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 TMEM192Q8IY95 271 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 DEFB106AQ8N104 65 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 PIWIL1Q96J94 861 aaKnown RBP12.62□□□□□ -0.39
UBE3B-204ENST00000449510 DACH2Q96NX9 599 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 TWNKQ96RR1 684 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 PLGRKTQ9HBL7 147 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.62□□□□□ -0.39
UBE3B-204ENST00000449510 FAM8A1Q9UBU6 413 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 ITGA11Q9UKX5 1188 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 NENFQ9UMX5 172 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 PCDHA11Q9Y5I1 949 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 LMO7Q8WWI1 1683 aa12.62□□□□□ -0.39
UBE3B-204ENST00000449510 RFPL1O75677 317 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 GTF2H3Q13889 308 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 SCN4BQ8IWT1 228 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 DHRSXQ8N5I4 330 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 PNPLA1Q8N8W4 532 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 THUMPD3Q9BV44 507 aaKnown RBP12.61□□□□□ -0.39
UBE3B-204ENST00000449510 PLEKHA5Q9HAU0 1116 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 TMPRSS4Q9NRS4 437 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 MFHAS1Q9Y4C4 1052 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 TEX264Q9Y6I9 313 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 CFAP99D6REC4 459 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 CCL22O00626 93 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 BNIP3LO60238 219 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 CXCR3P49682 368 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 PTP4A2Q12974 167 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 CTC1Q2NKJ3 1217 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 GJC2Q5T442 439 aaPredicted RBP12.61□□□□□ -0.39
UBE3B-204ENST00000449510 DCAF15Q66K64 600 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 CLEC6AQ6EIG7 209 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 ARMCX2Q7L311 632 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 XYLT1Q86Y38 959 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 DACT3Q96B18 629 aaPredicted RBP12.61□□□□□ -0.39
UBE3B-204ENST00000449510 CXorf21Q9HAI6 301 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 TRIM17Q9Y577 477 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 BCL9LQ86UU0 1499 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms