RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 CD38P28907 300 aa29.11■■■□□ 2.25
CBX4-202ENST00000448310 CLCN1P35523 988 aa29.11■■■□□ 2.25
CBX4-202ENST00000448310 KRT9P35527 623 aa29.11■■■□□ 2.25
CBX4-202ENST00000448310 CCR5P51681 352 aa29.11■■■□□ 2.25
CBX4-202ENST00000448310 CCDC86Q9H6F5 360 aaKnown RBP29.11■■■□□ 2.25
CBX4-202ENST00000448310 SYNCQ9H7C4 482 aa29.11■■■□□ 2.25
CBX4-202ENST00000448310 LHX6Q9UPM6 363 aa29.11■■■□□ 2.25
CBX4-202ENST00000448310 ADAMTS20P59510 1910 aa29.1■■■□□ 2.25
CBX4-202ENST00000448310 TBC1D3DA0A087WVF3 549 aa29.1■■■□□ 2.25
CBX4-202ENST00000448310 TBC1D3IA0A087WXS9 549 aa29.1■■■□□ 2.25
CBX4-202ENST00000448310 TBC1D3EA0A087X179 549 aa29.1■■■□□ 2.25
CBX4-202ENST00000448310 TBC1D3KA0A087X1G2 549 aa29.1■■■□□ 2.25
CBX4-202ENST00000448310 A0A1W2PR77 199 aa29.1■■■□□ 2.25
CBX4-202ENST00000448310 FAM170AA1A519 330 aa29.1■■■□□ 2.25
CBX4-202ENST00000448310 TBC1D3FA6NER0 549 aaPredicted RBP29.1■■■□□ 2.25
CBX4-202ENST00000448310 TBC1D3LB9A6J9 549 aa29.1■■■□□ 2.25
CBX4-202ENST00000448310 M0QYT0 321 aa29.1■■■□□ 2.25
CBX4-202ENST00000448310 PAGE1O75459 146 aa29.1■■■□□ 2.25
CBX4-202ENST00000448310 TBC1D3HP0C7X1 549 aa29.1■■■□□ 2.25
CBX4-202ENST00000448310 SLC6A3Q01959 620 aa29.1■■■□□ 2.25
CBX4-202ENST00000448310 TPD52L1Q16890 204 aaPredicted RBP29.1■■■□□ 2.25
CBX4-202ENST00000448310 ACCSLQ4AC99 568 aa29.1■■■□□ 2.25
CBX4-202ENST00000448310 OTUD1Q5VV17 481 aaPredicted RBP29.1■■■□□ 2.25
CBX4-202ENST00000448310 TBC1D3GQ6DHY5 549 aa29.1■■■□□ 2.25
CBX4-202ENST00000448310 TBC1D3CQ6IPX1 549 aa29.1■■■□□ 2.25
CBX4-202ENST00000448310 LRSAM1Q6UWE0 723 aa29.1■■■□□ 2.25
CBX4-202ENST00000448310 TBC1D3Q8IZP1 549 aaPredicted RBP29.1■■■□□ 2.25
CBX4-202ENST00000448310 SERAC1Q96JX3 654 aa29.1■■■□□ 2.25
CBX4-202ENST00000448310 SPAG5Q96R06 1193 aa29.1■■■□□ 2.25
CBX4-202ENST00000448310 ELF4Q99607 663 aaPredicted RBP29.1■■■□□ 2.25
CBX4-202ENST00000448310 SIK2Q9H0K1 926 aa29.1■■■□□ 2.25
CBX4-202ENST00000448310 SARDHQ9UL12 918 aa29.1■■■□□ 2.25
CBX4-202ENST00000448310 LAMA5O15230 3695 aa29.09■■■□□ 2.25
CBX4-202ENST00000448310 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP29.09■■■□□ 2.25
CBX4-202ENST00000448310 DFNA5O60443 496 aa29.09■■■□□ 2.25
CBX4-202ENST00000448310 OXCT1P55809 520 aa29.09■■■□□ 2.25
CBX4-202ENST00000448310 ZNF177Q13360 481 aaPredicted RBP29.09■■■□□ 2.25
CBX4-202ENST00000448310 SHBQ15464 509 aa29.09■■■□□ 2.25
CBX4-202ENST00000448310 POM121L1PQ3SYA9 428 aa29.09■■■□□ 2.25
CBX4-202ENST00000448310 SLC26A9Q7LBE3 791 aa29.09■■■□□ 2.25
CBX4-202ENST00000448310 SKA1Q96BD8 255 aa29.09■■■□□ 2.25
CBX4-202ENST00000448310 FEM1AQ9BSK4 669 aa29.09■■■□□ 2.25
CBX4-202ENST00000448310 FTSJ1Q9UET6 329 aa29.09■■■□□ 2.25
CBX4-202ENST00000448310 SLC25A13Q9UJS0 675 aa29.09■■■□□ 2.25
CBX4-202ENST00000448310 FAM149AA5PLN7 773 aa29.08■■■□□ 2.25
CBX4-202ENST00000448310 RTN2O75298 545 aa29.08■■■□□ 2.25
CBX4-202ENST00000448310 TFE3P19532 575 aaPredicted RBP29.08■■■□□ 2.25
CBX4-202ENST00000448310 NOS2P35228 1153 aa29.08■■■□□ 2.25
CBX4-202ENST00000448310 MAN2A1Q16706 1144 aa29.08■■■□□ 2.25
CBX4-202ENST00000448310 INAVAQ3KP66 663 aa29.08■■■□□ 2.25
CBX4-202ENST00000448310 HSP90AA4PQ58FG1 418 aa29.08■■■□□ 2.25
CBX4-202ENST00000448310 Q6ZVU0 165 aa29.08■■■□□ 2.25
CBX4-202ENST00000448310 MLKLQ8NB16 471 aa29.08■■■□□ 2.25
CBX4-202ENST00000448310 OR8D1Q8WZ84 308 aa29.08■■■□□ 2.25
CBX4-202ENST00000448310 ANLNQ9NQW6 1124 aa29.08■■■□□ 2.25
CBX4-202ENST00000448310 PIGVQ9NUD9 493 aa29.08■■■□□ 2.25
CBX4-202ENST00000448310 VPS28Q9UK41 221 aa29.08■■■□□ 2.25
CBX4-202ENST00000448310 OR51B4Q9Y5P0 310 aa29.08■■■□□ 2.25
CBX4-202ENST00000448310 SNX10Q9Y5X0 201 aa29.08■■■□□ 2.25
CBX4-202ENST00000448310 COL5A1P20908 1838 aaPredicted RBP29.08■■■□□ 2.25
CBX4-202ENST00000448310 CBX4O00257 560 aa29.07■■■□□ 2.24
CBX4-202ENST00000448310 ATP9BO43861 1147 aa29.07■■■□□ 2.24
CBX4-202ENST00000448310 HOXB3P14651 431 aaPredicted RBP29.07■■■□□ 2.24
CBX4-202ENST00000448310 RNASE9P60153 205 aaKnown RBP29.07■■■□□ 2.24
CBX4-202ENST00000448310 DLG2Q15700 870 aa29.07■■■□□ 2.24
CBX4-202ENST00000448310 GDF3Q9NR23 364 aa29.07■■■□□ 2.24
CBX4-202ENST00000448310 BNIP3LO60238 219 aa29.06■■■□□ 2.24
CBX4-202ENST00000448310 CNTN5O94779 1100 aa29.06■■■□□ 2.24
CBX4-202ENST00000448310 ADCY5O95622 1261 aa29.06■■■□□ 2.24
CBX4-202ENST00000448310 MAT2AP31153 395 aaKnown RBP29.06■■■□□ 2.24
CBX4-202ENST00000448310 DPY19L2P1Q6NXN4 242 aa29.06■■■□□ 2.24
CBX4-202ENST00000448310 C19orf48Q6RUI8 117 aa29.06■■■□□ 2.24
CBX4-202ENST00000448310 DHRS13Q6UX07 377 aa29.06■■■□□ 2.24
CBX4-202ENST00000448310 FAM71AQ8IYT1 594 aa29.06■■■□□ 2.24
CBX4-202ENST00000448310 ZNF397Q8NF99 534 aaPredicted RBP29.06■■■□□ 2.24
CBX4-202ENST00000448310 FAM131CQ96AQ9 280 aa29.06■■■□□ 2.24
CBX4-202ENST00000448310 PPP1R9BQ96SB3 815 aa29.06■■■□□ 2.24
CBX4-202ENST00000448310 NPY6RQ99463 290 aa29.06■■■□□ 2.24
CBX4-202ENST00000448310 ITPR1Q14643 2758 aa29.06■■■□□ 2.24
CBX4-202ENST00000448310 I6L893 689 aaPredicted RBP29.05■■■□□ 2.24
CBX4-202ENST00000448310 LATO43561 262 aa29.05■■■□□ 2.24
CBX4-202ENST00000448310 CLDN11O75508 207 aa29.05■■■□□ 2.24
CBX4-202ENST00000448310 ITGAVP06756 1048 aa29.05■■■□□ 2.24
CBX4-202ENST00000448310 SULT1E1P49888 294 aa29.05■■■□□ 2.24
CBX4-202ENST00000448310 VASPP50552 380 aaPredicted RBP29.05■■■□□ 2.24
CBX4-202ENST00000448310 SNX16P57768 344 aa29.05■■■□□ 2.24
CBX4-202ENST00000448310 CNTN1Q12860 1018 aa29.05■■■□□ 2.24
CBX4-202ENST00000448310 DSG4Q86SJ6 1040 aa29.05■■■□□ 2.24
CBX4-202ENST00000448310 GALNT15Q8N3T1 639 aa29.05■■■□□ 2.24
CBX4-202ENST00000448310 TKTL2Q9H0I9 626 aa29.05■■■□□ 2.24
CBX4-202ENST00000448310 MUC3BQ9H195 1237 aa29.05■■■□□ 2.24
CBX4-202ENST00000448310 NDST4Q9H3R1 872 aa29.05■■■□□ 2.24
CBX4-202ENST00000448310 NBEAQ8NFP9 2946 aa29.05■■■□□ 2.24
CBX4-202ENST00000448310 TLR4O00206 839 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 PLRG1O43660 514 aaKnown RBP29.04■■■□□ 2.24
CBX4-202ENST00000448310 PRKCSHP14314 528 aaPredicted RBP29.04■■■□□ 2.24
CBX4-202ENST00000448310 ZNF18P17022 549 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 CDH4P55283 916 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 NXPH1P58417 271 aa29.04■■■□□ 2.24
CBX4-202ENST00000448310 MTA1Q13330 715 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms