RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 TRIM24O15164 1050 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 CASC3O15234 703 aaKnown RBP5.35□□□□□ -1.55
SDCBP-205ENST00000447267 TSPAN1O60635 241 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 TSPAN3O60637 253 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 THP07101 528 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 LCP1P13796 627 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 NTSR1P30989 418 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 THBS2P35442 1172 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 TNFRSF4P43489 277 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 DNM2P50570 870 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 C21orf59P57076 290 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 CDC42EP1Q00587 391 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 ZC2HC1CQ53FD0 456 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-205ENST00000447267 VPS53Q5VIR6 699 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 TMEM150AQ86TG1 271 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 ZFAND4Q86XD8 727 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 ARL14EPQ8N8R7 260 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-205ENST00000447267 ATAD1Q8NBU5 361 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 LRRC15Q8TF66 581 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 JPH3Q8WXH2 748 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-205ENST00000447267 PSMG2Q969U7 264 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 ARRDC3Q96B67 414 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 SLC22A12Q96S37 553 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 RBM15Q96T37 977 aaKnown RBP eCLIP5.35□□□□□ -1.55
SDCBP-205ENST00000447267 TRIM6Q9C030 488 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-205ENST00000447267 ABCG4Q9H172 646 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 ITM2CQ9NQX7 267 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 ARHGEF4Q9NR80 690 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 ANAPC4Q9UJX5 808 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 NUDT5Q9UKK9 219 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 STRIP2Q9ULQ0 834 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 PCDHA6Q9UN73 950 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 PCDHGB6Q9Y5F9 930 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 PCDHGA8Q9Y5G5 932 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 PCDHA8Q9Y5H6 950 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 ENTPD2Q9Y5L3 495 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 ESPL1Q14674 2120 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 A0A1B0GVM2 712 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 H7C4K7 107 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 AGRPO00253 132 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 TBX3O15119 743 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 CYTH3O43739 400 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 MARCH6O60337 910 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 DFNA5O60443 496 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 SDC3O75056 442 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 CYP17A1P05093 508 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 KLK2P20151 261 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 EPHA8P29322 1005 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-205ENST00000447267 SLC6A4P31645 630 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 ETFBP38117 255 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 BCL6P41182 706 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 STAT5AP42229 794 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 GRIA2P42262 883 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 TPMTP51580 245 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 ADCY7P51828 1080 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 ZNF143P52747 638 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-205ENST00000447267 HDAC4P56524 1084 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 HAND2P61296 217 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 PRKCEQ02156 737 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 PLP2Q04941 152 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 ZNF77Q15935 545 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 UGCGQ16739 394 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 PRR30Q53SZ7 412 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-205ENST00000447267 GLRA4Q5JXX5 417 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 TMPRSS9Q7Z410 1059 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 DGKHQ86XP1 1220 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 CACUL1Q86Y37 369 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 PHC2Q8IXK0 858 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 CLASRPQ8N2M8 674 aaKnown RBP5.34□□□□□ -1.55
SDCBP-205ENST00000447267 ADAMTS17Q8TE56 1095 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 HPS3Q969F9 1004 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 PPP1R14AQ96A00 147 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 C1orf159Q96HA4 380 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 PGBD1Q96JS3 809 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 CEP89Q96ST8 783 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 KRTAP3-1Q9BYR8 98 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 CCSER2Q9H7U1 834 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 CAAP1Q9H8G2 361 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 USP36Q9P275 1121 aaKnown RBP5.34□□□□□ -1.55
SDCBP-205ENST00000447267 MAD2L2Q9UI95 211 aa5.34□□□□□ -1.55
SDCBP-205ENST00000447267 RP1L1Q8IWN7 2480 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-205ENST00000447267 IGKV6-21A0A0C4DH24 114 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 EFCAB7A8K855 629 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 RNF212BA8MTL3 300 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 B4GALT5O43286 388 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 TRAPPC3O43617 180 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 SUSD5O60279 629 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 ERLIN2O94905 339 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 FSBPO95073 299 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 FGF19O95750 216 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 SCG5P05408 212 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 HGFP14210 728 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 TGM2P21980 687 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 CDC25CP30307 473 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 ITGA1P56199 1179 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 GRIN1Q05586 938 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 RESTQ13127 1097 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 CR1LQ2VPA4 569 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 PRR31Q5SQ13 230 aa5.33□□□□□ -1.56
SDCBP-205ENST00000447267 SFMBT2Q5VUG0 894 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms