RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 PGAM4Q8N0Y7 254 aa8.01□□□□□ -1.13
SMG1-202ENST00000446231 B3GALT6Q96L58 329 aa8.01□□□□□ -1.13
SMG1-202ENST00000446231 DDX43Q9NXZ2 648 aaKnown RBP8.01□□□□□ -1.13
SMG1-202ENST00000446231 AKT3Q9Y243 479 aa8.01□□□□□ -1.13
SMG1-202ENST00000446231 ATP8B3O60423 1300 aa8.01□□□□□ -1.13
SMG1-202ENST00000446231 CLTCL1P53675 1640 aa8.01□□□□□ -1.13
SMG1-202ENST00000446231 EML1O00423 815 aa8.01□□□□□ -1.13
SMG1-202ENST00000446231 ANXA6P08133 673 aa8.01□□□□□ -1.13
SMG1-202ENST00000446231 PALB2Q86YC2 1186 aa8.01□□□□□ -1.13
SMG1-202ENST00000446231 PHF13Q86YI8 300 aaPredicted RBP8.01□□□□□ -1.13
SMG1-202ENST00000446231 CDYL2Q8N8U2 506 aa8.01□□□□□ -1.13
SMG1-202ENST00000446231 HMGCRP04035 888 aa8.01□□□□□ -1.13
SMG1-202ENST00000446231 CHRNB2P17787 502 aa8.01□□□□□ -1.13
SMG1-202ENST00000446231 GNG2P59768 71 aa8.01□□□□□ -1.13
SMG1-202ENST00000446231 FMO1Q01740 532 aa8.01□□□□□ -1.13
SMG1-202ENST00000446231 RELAQ04206 551 aa8.01□□□□□ -1.13
SMG1-202ENST00000446231 ATG16L2Q8NAA4 619 aa8.01□□□□□ -1.13
SMG1-202ENST00000446231 PNPT1Q8TCS8 783 aaKnown RBP8.01□□□□□ -1.13
SMG1-202ENST00000446231 C5orf58C9J3I9 102 aa8.01□□□□□ -1.13
SMG1-202ENST00000446231 CD97P48960 835 aa8.01□□□□□ -1.13
SMG1-202ENST00000446231 ING3Q9NXR8 418 aa8.01□□□□□ -1.13
SMG1-202ENST00000446231 VIRMAQ69YN4 1812 aaKnown RBP8□□□□□ -1.13
SMG1-202ENST00000446231 SPTLC1O15269 473 aa8□□□□□ -1.13
SMG1-202ENST00000446231 OAS1P00973 400 aaKnown RBP8□□□□□ -1.13
SMG1-202ENST00000446231 AKR1D1P51857 326 aa8□□□□□ -1.13
SMG1-202ENST00000446231 TRAP1Q12931 704 aaKnown RBP8□□□□□ -1.13
SMG1-202ENST00000446231 DCAF12L1Q5VU92 463 aa8□□□□□ -1.13
SMG1-202ENST00000446231 ZNF544Q6NX49 715 aa8□□□□□ -1.13
SMG1-202ENST00000446231 SLC22A16Q86VW1 577 aa8□□□□□ -1.13
SMG1-202ENST00000446231 LARGE2Q8N3Y3 721 aa8□□□□□ -1.13
SMG1-202ENST00000446231 TBCBQ99426 244 aa8□□□□□ -1.13
SMG1-202ENST00000446231 SP140LQ9H930 580 aa8□□□□□ -1.13
SMG1-202ENST00000446231 FETUBQ9UGM5 382 aa8□□□□□ -1.13
SMG1-202ENST00000446231 NDUFS3O75489 264 aa8□□□□□ -1.13
SMG1-202ENST00000446231 S100A9P06702 114 aaKnown RBP8□□□□□ -1.13
SMG1-202ENST00000446231 LRRC49Q8IUZ0 686 aa8□□□□□ -1.13
SMG1-202ENST00000446231 MARVELD2Q8N4S9 558 aa8□□□□□ -1.13
SMG1-202ENST00000446231 CHST12Q9NRB3 414 aa8□□□□□ -1.13
SMG1-202ENST00000446231 PIH1D1Q9NWS0 290 aaKnown RBP8□□□□□ -1.13
SMG1-202ENST00000446231 ADCY10Q96PN6 1610 aa8□□□□□ -1.13
SMG1-202ENST00000446231 APOC4-APOC2K7ER74 178 aa8□□□□□ -1.13
SMG1-202ENST00000446231 APOC2P02655 101 aa8□□□□□ -1.13
SMG1-202ENST00000446231 PRICKLE1Q96MT3 831 aaPredicted RBP8□□□□□ -1.13
SMG1-202ENST00000446231 SARS2Q9NP81 518 aaKnown RBP8□□□□□ -1.13
SMG1-202ENST00000446231 ANKEF1Q9NU02 776 aa8□□□□□ -1.13
SMG1-202ENST00000446231 FBXO9Q9UK97 447 aaPredicted RBP8□□□□□ -1.13
SMG1-202ENST00000446231 CACNA1IQ9P0X4 2223 aa8□□□□□ -1.13
SMG1-202ENST00000446231 USP12O75317 370 aa8□□□□□ -1.13
SMG1-202ENST00000446231 FAM155BO75949 473 aa8□□□□□ -1.13
SMG1-202ENST00000446231 CDK4P11802 303 aa8□□□□□ -1.13
SMG1-202ENST00000446231 PIK3R3Q92569 461 aa8□□□□□ -1.13
SMG1-202ENST00000446231 YIPF2Q9BWQ6 316 aa8□□□□□ -1.13
SMG1-202ENST00000446231 ILVBLA1L0T0 632 aa8□□□□□ -1.13
SMG1-202ENST00000446231 TCP10L2B9ZVM9 353 aa8□□□□□ -1.13
SMG1-202ENST00000446231 CCRL2O00421 344 aa8□□□□□ -1.13
SMG1-202ENST00000446231 TSPAN4O14817 238 aa8□□□□□ -1.13
SMG1-202ENST00000446231 MTA2O94776 668 aa8□□□□□ -1.13
SMG1-202ENST00000446231 IL18RAPO95256 599 aa8□□□□□ -1.13
SMG1-202ENST00000446231 GCNT1Q02742 428 aa8□□□□□ -1.13
SMG1-202ENST00000446231 CCSAPQ6IQ19 270 aaPredicted RBP8□□□□□ -1.13
SMG1-202ENST00000446231 ZNF276Q8N554 614 aa8□□□□□ -1.13
SMG1-202ENST00000446231 GINS4Q9BRT9 223 aa8□□□□□ -1.13
SMG1-202ENST00000446231 C17orf75Q9HAS0 396 aa8□□□□□ -1.13
SMG1-202ENST00000446231 GPATCH2LQ9NWQ4 482 aa8□□□□□ -1.13
SMG1-202ENST00000446231 EIF3LQ9Y262 564 aaKnown RBP8□□□□□ -1.13
SMG1-202ENST00000446231 FARP2O94887 1054 aaPredicted RBP8□□□□□ -1.13
SMG1-202ENST00000446231 NPTX2P47972 431 aa8□□□□□ -1.13
SMG1-202ENST00000446231 CCT8P50990 548 aa8□□□□□ -1.13
SMG1-202ENST00000446231 CSHL1Q14406 222 aa8□□□□□ -1.13
SMG1-202ENST00000446231 ECM1Q16610 540 aa8□□□□□ -1.13
SMG1-202ENST00000446231 COLEC12Q5KU26 742 aa8□□□□□ -1.13
SMG1-202ENST00000446231 KIF12Q96FN5 646 aa8□□□□□ -1.13
SMG1-202ENST00000446231 YME1L1Q96TA2 773 aa8□□□□□ -1.13
SMG1-202ENST00000446231 PKP2Q99959 881 aa8□□□□□ -1.13
SMG1-202ENST00000446231 PRKCQQ04759 706 aa8□□□□□ -1.13
SMG1-202ENST00000446231 DOK7Q18PE1 504 aa8□□□□□ -1.13
SMG1-202ENST00000446231 C15orf59Q2T9L4 293 aaPredicted RBP8□□□□□ -1.13
SMG1-202ENST00000446231 TMEM126BQ8IUX1 230 aa8□□□□□ -1.13
SMG1-202ENST00000446231 FAM167AQ96KS9 214 aa8□□□□□ -1.13
SMG1-202ENST00000446231 AAASQ9NRG9 546 aa8□□□□□ -1.13
SMG1-202ENST00000446231 GPRC5DQ9NZD1 345 aa8□□□□□ -1.13
SMG1-202ENST00000446231 PEX16Q9Y5Y5 336 aa8□□□□□ -1.13
SMG1-202ENST00000446231 ITGAXP20702 1163 aa8□□□□□ -1.13
SMG1-202ENST00000446231 HSD17B4P51659 736 aa8□□□□□ -1.13
SMG1-202ENST00000446231 NAGLUP54802 743 aa8□□□□□ -1.13
SMG1-202ENST00000446231 TP53BP2Q13625 1128 aa8□□□□□ -1.13
SMG1-202ENST00000446231 PTF1AQ7RTS3 328 aa8□□□□□ -1.13
SMG1-202ENST00000446231 EID3Q8N140 333 aa8□□□□□ -1.13
SMG1-202ENST00000446231 SAMD3Q8N6K7 520 aa8□□□□□ -1.13
SMG1-202ENST00000446231 MIPEPQ99797 713 aa8□□□□□ -1.13
SMG1-202ENST00000446231 TLE6Q9H808 572 aa8□□□□□ -1.13
SMG1-202ENST00000446231 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8□□□□□ -1.13
SMG1-202ENST00000446231 UNC5AQ6ZN44 842 aa8□□□□□ -1.13
SMG1-202ENST00000446231 HPDLQ96IR7 371 aa8□□□□□ -1.13
SMG1-202ENST00000446231 MST1RQ04912 1400 aa8□□□□□ -1.13
SMG1-202ENST00000446231 RGS20O76081 388 aa8□□□□□ -1.13
SMG1-202ENST00000446231 RRM2P31350 389 aa8□□□□□ -1.13
SMG1-202ENST00000446231 EMC2Q15006 297 aa8□□□□□ -1.13
SMG1-202ENST00000446231 GATAD2AQ86YP4 633 aa8□□□□□ -1.13
SMG1-202ENST00000446231 PPP1R2P1Q96PQ5 205 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms