RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 SLC39A5Q6ZMH5 540 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 GALNT16Q8N428 558 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 USP38Q8NB14 1042 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 CPT1BQ92523 772 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 MAP4K1Q92918 833 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 RNF125Q96EQ8 232 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 EFHD1Q9BUP0 239 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 TM2D2Q9BX73 214 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 SEMA4CQ9C0C4 833 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 NUAK2Q9H093 628 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 BRD8Q9H0E9 1235 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 CHODLQ9H9P2 273 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 PLSCR4Q9NRQ2 329 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 HAUS2Q9NVX0 235 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 ASNSD1Q9NWL6 643 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 NDUFAF4Q9P032 175 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 PTGFRNQ9P2B2 879 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 NFKBIL1Q9UBC1 381 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 SLC12A4Q9UP95 1085 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 RCE1Q9Y256 329 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 LMTK3Q96Q04 1460 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 FAM170AA1A519 330 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 TTC34A8MYJ7 566 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 ANP32CO43423 234 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 TSPAN3O60637 253 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 PTP4A3O75365 173 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 SGPL1O95470 568 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 DNTTP04053 509 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 ABCD3P28288 659 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 GRK5P34947 590 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 HOXD13P35453 343 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 SOX2P48431 317 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 VPS41P49754 854 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 CCT4P50991 539 aaKnown RBP4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 CFHR1Q03591 330 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 GALNT2Q10471 571 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 CUL4AQ13619 759 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 RPS6KA2Q15349 733 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 CEP78Q5JTW2 689 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 SYCE2Q6PIF2 218 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 ZNF474Q6S9Z5 364 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 RINLQ6ZS11 566 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 TMTC3Q6ZXV5 915 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 R3HCC1LQ7Z5L2 792 aaKnown RBP4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 ARMC8Q8IUR7 673 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 ADGRF3Q8IZF5 1079 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 NGEFQ8N5V2 710 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 CLEC4CQ8WTT0 213 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 TBC1D22AQ8WUA7 517 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 CELF1Q92879 486 aaKnown RBP4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 ZMAT2Q96NC0 199 aaKnown RBP4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 GPR78Q96P69 363 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 ARHGAP39Q9C0H5 1083 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 ADARB2Q9NS39 739 aaKnown RBP4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 MAFFQ9ULX9 164 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 DNAJC16Q9Y2G8 782 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 FRMD4BQ9Y2L6 1034 aa4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 HEMK1Q9Y5R4 338 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 MAGED1Q9Y5V3 778 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P48-201ENST00000446155 STARD3NLO95772 234 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 SCGB1D1O95968 90 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 ALDOAP04075 364 aaKnown RBP4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 GLULP15104 373 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 CERS1P27544 350 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 CD38P28907 300 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 ACTN2P35609 894 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 MCM2P49736 904 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 YPEL5P62699 121 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 ROR1Q01973 937 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 EIF4A2Q14240 407 aaKnown RBP4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 GPR68Q15743 365 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 BAK1Q16611 211 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 PFKFB3Q16875 520 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 CTXN3Q4LDR2 81 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 ZNF569Q5MCW4 686 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 CC2D1BQ5T0F9 858 aaKnown RBP4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 SNX30Q5VWJ9 437 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 KIAA1614Q5VZ46 1190 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 RTL10Q7L3V2 364 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 SYT13Q7L8C5 426 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 RASGRP2Q7LDG7 609 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 CREB3L4Q8TEY5 395 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 WIPF2Q8TF74 440 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 ATP2A3Q93084 1043 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 FCRL5Q96RD9 977 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 PDGFCQ9NRA1 345 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 SLC22A11Q9NSA0 550 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 KCND3Q9UK17 655 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 HSF4Q9ULV5 492 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 COPG1Q9Y678 874 aaKnown RBP4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 RPGRIP1LQ68CZ1 1315 aa4.85□□□□□ -1.63
HMGB1P48-201ENST00000446155 RSF1Q96T23 1441 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 WDR17Q8IZU2 1322 aa4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 VWA3AA6NCI4 1184 aa4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 AGAP5A6NIR3 686 aa4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 STX16-NPEPL1H3BU86 382 aa4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 PPP6CO00743 305 aa4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 STX16O14662 325 aa4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 DKC1O60832 514 aaKnown RBP eCLIP4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 BCAR3O75815 825 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms