RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 LVRNQ6Q4G3 990 aa16.02■□□□□ 0.16
SNX13-204ENST00000444712 PRSS55Q6UWB4 352 aaPredicted RBP16.02■□□□□ 0.16
SNX13-204ENST00000444712 TMEM173Q86WV6 379 aaPredicted RBP16.02■□□□□ 0.16
SNX13-204ENST00000444712 UMODL1-AS1Q8N2C9 162 aa16.02■□□□□ 0.16
SNX13-204ENST00000444712 ANKLE1Q8NAG6 615 aa16.02■□□□□ 0.16
SNX13-204ENST00000444712 STKLD1Q8NE28 680 aa16.02■□□□□ 0.16
SNX13-204ENST00000444712 LRRC8CQ8TDW0 803 aa16.02■□□□□ 0.16
SNX13-204ENST00000444712 BCL7CQ8WUZ0 217 aaPredicted RBP16.02■□□□□ 0.16
SNX13-204ENST00000444712 FCRL5Q96RD9 977 aa16.02■□□□□ 0.16
SNX13-204ENST00000444712 SLC39A8Q9C0K1 460 aa16.02■□□□□ 0.16
SNX13-204ENST00000444712 IL22Q9GZX6 179 aa16.02■□□□□ 0.16
SNX13-204ENST00000444712 IQCGQ9H095 443 aaKnown RBP16.02■□□□□ 0.16
SNX13-204ENST00000444712 RETREG1Q9H6L5 497 aa16.02■□□□□ 0.16
SNX13-204ENST00000444712 PRDM5Q9NQX1 630 aaPredicted RBP16.02■□□□□ 0.16
SNX13-204ENST00000444712 TMEM39AQ9NV64 488 aa16.02■□□□□ 0.16
SNX13-204ENST00000444712 SYBUQ9NX95 663 aa16.02■□□□□ 0.16
SNX13-204ENST00000444712 HTTP42858 3142 aa16.02■□□□□ 0.16
SNX13-204ENST00000444712 IGLV3-10A0A075B6K4 115 aa16.02■□□□□ 0.15
SNX13-204ENST00000444712 MAFKO60675 156 aa16.02■□□□□ 0.15
SNX13-204ENST00000444712 PBX3P40426 434 aa16.02■□□□□ 0.15
SNX13-204ENST00000444712 GEMP55040 296 aa16.02■□□□□ 0.15
SNX13-204ENST00000444712 CDH17Q12864 832 aa16.02■□□□□ 0.15
SNX13-204ENST00000444712 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.02■□□□□ 0.15
SNX13-204ENST00000444712 CCDC121Q6ZUS5 278 aa16.02■□□□□ 0.15
SNX13-204ENST00000444712 OTUD6BQ8N6M0 293 aa16.02■□□□□ 0.15
SNX13-204ENST00000444712 OR52K1Q8NGK4 314 aa16.02■□□□□ 0.15
SNX13-204ENST00000444712 ZSCAN18Q8TBC5 510 aaPredicted RBP16.02■□□□□ 0.15
SNX13-204ENST00000444712 ELAC2Q9BQ52 826 aaKnown RBP16.02■□□□□ 0.15
SNX13-204ENST00000444712 GORASP1Q9BQQ3 440 aa16.02■□□□□ 0.15
SNX13-204ENST00000444712 FGFR1OP2Q9NVK5 253 aa16.02■□□□□ 0.15
SNX13-204ENST00000444712 AFF4Q9UHB7 1163 aaKnown RBP16.02■□□□□ 0.15
SNX13-204ENST00000444712 ATP11BQ9Y2G3 1177 aa16.02■□□□□ 0.15
SNX13-204ENST00000444712 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.01■□□□□ 0.15
SNX13-204ENST00000444712 SLC12A8A0AV02 714 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 CXorf49A8MYA2 514 aaPredicted RBP16.01■□□□□ 0.15
SNX13-204ENST00000444712 SNX3O60493 162 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 SOAT2O75908 522 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 PIAS1O75925 651 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 USP1O94782 785 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 CLTBP09497 229 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 CSH1P0DML2 217 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 CSH2P0DML3 217 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 TAC1P20366 129 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 CORO7P57737 925 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 MGAT5Q09328 741 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 NIPAL4Q0D2K0 466 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 IFT88Q13099 833 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 SPOUT1Q5T280 376 aaKnown RBP16.01■□□□□ 0.15
SNX13-204ENST00000444712 ARMC3Q5W041 872 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 TPGS2Q68CL5 300 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 TRMT10BQ6PF06 316 aaKnown RBP16.01■□□□□ 0.15
SNX13-204ENST00000444712 TAS1R1Q7RTX1 841 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 ZNF683Q8IZ20 524 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 TCP10LQ8TDR4 215 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 GPR152Q8TDT2 470 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 ZNF558Q96NG5 402 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 MLPHQ9BV36 600 aaPredicted RBP16.01■□□□□ 0.15
SNX13-204ENST00000444712 VPS11Q9H270 941 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 CRISPLD1Q9H336 500 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 SMYD2Q9NRG4 433 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 COPEO14579 308 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 TLR5O60602 858 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 SOD2P04179 222 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 CCNFP41002 786 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 NEK3P51956 506 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 SLC1A5Q15758 541 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 ARTNQ5T4W7 220 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 RASIP1Q5U651 963 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 TIFABQ6ZNK6 161 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 C14orf80Q86SX3 495 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 CCDC117Q8IWD4 279 aaPredicted RBP16.01■□□□□ 0.15
SNX13-204ENST00000444712 OXNAD1Q96HP4 312 aaPredicted RBP16.01■□□□□ 0.15
SNX13-204ENST00000444712 GLOD4Q9HC38 313 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 TXNDC16Q9P2K2 825 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 USP15Q9Y4E8 981 aaPredicted RBP16.01■□□□□ 0.15
SNX13-204ENST00000444712 RPS6KL1Q9Y6S9 549 aa16.01■□□□□ 0.15
SNX13-204ENST00000444712 COL4A6Q14031 1691 aa16■□□□□ 0.15
SNX13-204ENST00000444712 FAM237BA0A1B0GVD1 139 aa16■□□□□ 0.15
SNX13-204ENST00000444712 OAS1P00973 400 aaKnown RBP16■□□□□ 0.15
SNX13-204ENST00000444712 PYGBP11216 843 aa16■□□□□ 0.15
SNX13-204ENST00000444712 ATF6P18850 670 aa16■□□□□ 0.15
SNX13-204ENST00000444712 OR1D2P34982 312 aa16■□□□□ 0.15
SNX13-204ENST00000444712 SNX30Q5VWJ9 437 aa16■□□□□ 0.15
SNX13-204ENST00000444712 MIB1Q86YT6 1006 aa16■□□□□ 0.15
SNX13-204ENST00000444712 SERBP1Q8NC51 408 aaKnown RBP eCLIP16■□□□□ 0.15
SNX13-204ENST00000444712 ACMSDQ8TDX5 336 aa16■□□□□ 0.15
SNX13-204ENST00000444712 NSMCE1Q8WV22 266 aa16■□□□□ 0.15
SNX13-204ENST00000444712 TOP1MTQ969P6 601 aa16■□□□□ 0.15
SNX13-204ENST00000444712 CERS2Q96G23 380 aa16■□□□□ 0.15
SNX13-204ENST00000444712 TMEM169Q96HH4 297 aa16■□□□□ 0.15
SNX13-204ENST00000444712 SERAC1Q96JX3 654 aa16■□□□□ 0.15
SNX13-204ENST00000444712 HERC2P3Q9BVR0 1158 aa16■□□□□ 0.15
SNX13-204ENST00000444712 PITPNM3Q9BZ71 974 aa16■□□□□ 0.15
SNX13-204ENST00000444712 MPP6Q9NZW5 540 aa16■□□□□ 0.15
SNX13-204ENST00000444712 ZFATQ9P243 1243 aa16■□□□□ 0.15
SNX13-204ENST00000444712 IPO11Q9UI26 975 aaKnown RBP16■□□□□ 0.15
SNX13-204ENST00000444712 DNMT3LQ9UJW3 386 aa16■□□□□ 0.15
SNX13-204ENST00000444712 MIA3Q5JRA6 1907 aa16■□□□□ 0.15
SNX13-204ENST00000444712 DRGXA6NNA5 263 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 GOLGA8RI6L899 631 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms