RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 CEP135Q66GS9 1140 aa14.39□□□□□ -0.11
LINC00642-202ENST00000442515 MSANTD2Q6P1R3 559 aa14.39□□□□□ -0.11
LINC00642-202ENST00000442515 GUSBP11Q6P575 273 aa14.39□□□□□ -0.11
LINC00642-202ENST00000442515 USP53Q70EK8 1073 aa14.39□□□□□ -0.11
LINC00642-202ENST00000442515 CCDC117Q8IWD4 279 aaPredicted RBP14.39□□□□□ -0.11
LINC00642-202ENST00000442515 APCDD1Q8J025 514 aa14.39□□□□□ -0.11
LINC00642-202ENST00000442515 SLC22A18ASQ8N1D0 253 aa14.39□□□□□ -0.11
LINC00642-202ENST00000442515 IQUBQ8NA54 791 aa14.39□□□□□ -0.11
LINC00642-202ENST00000442515 OR13H1Q8NG92 308 aa14.39□□□□□ -0.11
LINC00642-202ENST00000442515 SGF29Q96ES7 293 aa14.39□□□□□ -0.11
LINC00642-202ENST00000442515 NUCKS1Q9H1E3 243 aaKnown RBP14.39□□□□□ -0.11
LINC00642-202ENST00000442515 FZD3Q9NPG1 666 aa14.39□□□□□ -0.11
LINC00642-202ENST00000442515 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.38□□□□□ -0.11
LINC00642-202ENST00000442515 NEMP2A6NFY4 417 aa14.38□□□□□ -0.11
LINC00642-202ENST00000442515 SLC31A1O15431 190 aa14.38□□□□□ -0.11
LINC00642-202ENST00000442515 ITGA2BP08514 1039 aa14.38□□□□□ -0.11
LINC00642-202ENST00000442515 MLLT3P42568 568 aaPredicted RBP14.38□□□□□ -0.11
LINC00642-202ENST00000442515 PDX1P52945 283 aa14.38□□□□□ -0.11
LINC00642-202ENST00000442515 SRSF6Q13247 344 aaKnown RBP14.38□□□□□ -0.11
LINC00642-202ENST00000442515 ZNF177Q13360 481 aaPredicted RBP14.38□□□□□ -0.11
LINC00642-202ENST00000442515 UBAP2LQ14157 1087 aaKnown RBP14.38□□□□□ -0.11
LINC00642-202ENST00000442515 CRTC1Q6UUV9 634 aa14.38□□□□□ -0.11
LINC00642-202ENST00000442515 EFL1Q7Z2Z2 1120 aaKnown RBP14.38□□□□□ -0.11
LINC00642-202ENST00000442515 SIX6OS1Q8N1H7 587 aa14.38□□□□□ -0.11
LINC00642-202ENST00000442515 CFAP52Q8N1V2 620 aa14.38□□□□□ -0.11
LINC00642-202ENST00000442515 WDR36Q8NI36 951 aaKnown RBP14.38□□□□□ -0.11
LINC00642-202ENST00000442515 KLK6Q92876 244 aa14.38□□□□□ -0.11
LINC00642-202ENST00000442515 NOX5Q96PH1 765 aa14.38□□□□□ -0.11
LINC00642-202ENST00000442515 PREBQ9HCU5 417 aa14.38□□□□□ -0.11
LINC00642-202ENST00000442515 CISHQ9NSE2 258 aa14.38□□□□□ -0.11
LINC00642-202ENST00000442515 TSPAN16Q9UKR8 245 aa14.38□□□□□ -0.11
LINC00642-202ENST00000442515 A0A1W2PQU0 124 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 CPED1A4D0V7 1026 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 TCEA3O75764 348 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 GJB6O95452 261 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 VAMP7P51809 220 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 TBX4P57082 545 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 DAOAP59103 153 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 TAS2R38P59533 333 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 PPP3CAQ08209 521 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 DCAF6Q58WW2 860 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 MS4A13Q5J8X5 152 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 FAM46CQ5VWP2 391 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 ZCCHC8Q6NZY4 707 aaKnown RBP14.37□□□□□ -0.11
LINC00642-202ENST00000442515 DSG4Q86SJ6 1040 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 KIAA0895Q8NCT3 520 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 CCDC150Q8NCX0 1101 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 ZNF548Q8NEK5 533 aaPredicted RBP14.37□□□□□ -0.11
LINC00642-202ENST00000442515 FRS2Q8WU20 508 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 AZIN2Q96A70 460 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 DDX50Q9BQ39 737 aaKnown RBP14.37□□□□□ -0.11
LINC00642-202ENST00000442515 KCTD10Q9H3F6 313 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 MMRN2Q9H8L6 949 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 CNGB3Q9NQW8 809 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 DNAJC28Q9NX36 388 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 SEPT3Q9UH03 358 aa14.37□□□□□ -0.11
LINC00642-202ENST00000442515 SPTAN1Q13813 2472 aaKnown RBP14.36□□□□□ -0.11
LINC00642-202ENST00000442515 PVALEFA0A1B0GWK0 134 aa14.36□□□□□ -0.11
LINC00642-202ENST00000442515 C1QTNF3-AMACRE9PGA6 284 aa14.36□□□□□ -0.11
LINC00642-202ENST00000442515 CASC3O15234 703 aaKnown RBP14.36□□□□□ -0.11
LINC00642-202ENST00000442515 AKT2P31751 481 aa14.36□□□□□ -0.11
LINC00642-202ENST00000442515 NNMTP40261 264 aa14.36□□□□□ -0.11
LINC00642-202ENST00000442515 CLDN2P57739 230 aa14.36□□□□□ -0.11
LINC00642-202ENST00000442515 HNRNPKP61978 463 aaKnown RBP eCLIP14.36□□□□□ -0.11
LINC00642-202ENST00000442515 BST2Q10589 180 aaKnown RBP14.36□□□□□ -0.11
LINC00642-202ENST00000442515 STK4Q13043 487 aa14.36□□□□□ -0.11
LINC00642-202ENST00000442515 CUL4BQ13620 913 aa14.36□□□□□ -0.11
LINC00642-202ENST00000442515 DRAP1Q14919 205 aaPredicted RBP14.36□□□□□ -0.11
LINC00642-202ENST00000442515 GCNT7Q6ZNI0 430 aa14.36□□□□□ -0.11
LINC00642-202ENST00000442515 ABI3BPQ7Z7G0 1075 aa14.36□□□□□ -0.11
LINC00642-202ENST00000442515 TTC39CQ8N584 583 aa14.36□□□□□ -0.11
LINC00642-202ENST00000442515 TPCN2Q8NHX9 752 aa14.36□□□□□ -0.11
LINC00642-202ENST00000442515 OR8D1Q8WZ84 308 aa14.36□□□□□ -0.11
LINC00642-202ENST00000442515 IFT43Q96FT9 208 aa14.36□□□□□ -0.11
LINC00642-202ENST00000442515 FCRL2Q96LA5 508 aaPredicted RBP14.36□□□□□ -0.11
LINC00642-202ENST00000442515 SEMA3CQ99985 751 aa14.36□□□□□ -0.11
LINC00642-202ENST00000442515 MAGEF1Q9HAY2 307 aa14.36□□□□□ -0.11
LINC00642-202ENST00000442515 PPM1HQ9ULR3 514 aa14.36□□□□□ -0.11
LINC00642-202ENST00000442515 FRMD4BQ9Y2L6 1034 aa14.36□□□□□ -0.11
LINC00642-202ENST00000442515 CCDC187A0A096LP49 1063 aa14.35□□□□□ -0.11
LINC00642-202ENST00000442515 EME2A4GXA9 379 aaPredicted RBP14.35□□□□□ -0.11
LINC00642-202ENST00000442515 SFTPCP11686 197 aa14.35□□□□□ -0.11
LINC00642-202ENST00000442515 LCP1P13796 627 aa14.35□□□□□ -0.11
LINC00642-202ENST00000442515 CR2P20023 1033 aa14.35□□□□□ -0.11
LINC00642-202ENST00000442515 HNRNPA2B1P22626 353 aaKnown RBP14.35□□□□□ -0.11
LINC00642-202ENST00000442515 NASPP49321 788 aaPredicted RBP14.35□□□□□ -0.11
LINC00642-202ENST00000442515 INHBCP55103 352 aa14.35□□□□□ -0.11
LINC00642-202ENST00000442515 STK38Q15208 465 aa14.35□□□□□ -0.11
LINC00642-202ENST00000442515 TGIF1Q15583 401 aa14.35□□□□□ -0.11
LINC00642-202ENST00000442515 ZNF284Q2VY69 593 aa14.35□□□□□ -0.11
LINC00642-202ENST00000442515 PIP5KL1Q5T9C9 394 aa14.35□□□□□ -0.11
LINC00642-202ENST00000442515 OR6B2Q6IFH4 312 aa14.35□□□□□ -0.11
LINC00642-202ENST00000442515 PTAR1Q7Z6K3 402 aaPredicted RBP14.35□□□□□ -0.11
LINC00642-202ENST00000442515 SCML4Q8N228 414 aa14.35□□□□□ -0.11
LINC00642-202ENST00000442515 KCTD13Q8WZ19 329 aa14.35□□□□□ -0.11
LINC00642-202ENST00000442515 SEMA4DQ92854 862 aa14.35□□□□□ -0.11
LINC00642-202ENST00000442515 NCKIPSDQ9NZQ3 722 aa14.35□□□□□ -0.11
LINC00642-202ENST00000442515 HESX1Q9UBX0 185 aa14.35□□□□□ -0.11
LINC00642-202ENST00000442515 XPO7Q9UIA9 1087 aaKnown RBP14.35□□□□□ -0.11
LINC00642-202ENST00000442515 COL27A1Q8IZC6 1860 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms