RNA–Protein interactions for RNA: ENST00000441114.5

SHH-204, Transcript of sonic hedgehog, humanhuman

TSL 1 (best)

Gene SHH, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHH-204ENST00000441114 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.14■□□□□ 0.65
SHH-204ENST00000441114 TMPRSS6Q8IU80 811 aa19.14■□□□□ 0.65
SHH-204ENST00000441114 PSMB7Q99436 277 aa19.14■□□□□ 0.65
SHH-204ENST00000441114 MKRN2Q9H000 416 aaKnown RBP19.14■□□□□ 0.65
SHH-204ENST00000441114 ZNF212Q9UDV6 495 aa19.14■□□□□ 0.65
SHH-204ENST00000441114 NYNRINQ9P2P1 1898 aaKnown RBP19.14■□□□□ 0.65
SHH-204ENST00000441114 ILVBLA1L0T0 632 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 TMEM110-MUSTN1A8MSY1 372 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 MAP3K13O43283 966 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 SIN3BO75182 1162 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 TCF4P15884 667 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 BCKDHBP21953 392 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 GLDCP23378 1020 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 COPAP53621 1224 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 TPI1P60174 286 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 GNA12Q03113 381 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 CAMK2GQ13555 558 aaPredicted RBP19.13■□□□□ 0.65
SHH-204ENST00000441114 ACAP1Q15027 740 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 SMTNL2Q2TAL5 461 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 PPP6R3Q5H9R7 873 aaPredicted RBP19.13■□□□□ 0.65
SHH-204ENST00000441114 IL31Q6EBC2 164 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 NLRP14Q86W24 1093 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 OR2T3Q8NH03 318 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 HSPH1Q92598 858 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 PRCCQ92733 491 aaPredicted RBP19.13■□□□□ 0.65
SHH-204ENST00000441114 SIPA1Q96FS4 1042 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 SPACA7Q96KW9 195 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 KCTD15Q96SI1 283 aaPredicted RBP19.13■□□□□ 0.65
SHH-204ENST00000441114 NCAPGQ9BPX3 1015 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 ATP13A1Q9HD20 1204 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 CD93Q9NPY3 652 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 TMEM248Q9NWD8 314 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 NCDNQ9UBB6 729 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 CYP8B1Q9UNU6 501 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 NEU3Q9UQ49 428 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 CEP192Q8TEP8 1941 aa19.13■□□□□ 0.65
SHH-204ENST00000441114 CBX4O00257 560 aa19.12■□□□□ 0.65
SHH-204ENST00000441114 EEF2KO00418 725 aaKnown RBP19.12■□□□□ 0.65
SHH-204ENST00000441114 DAPK3O43293 454 aa19.12■□□□□ 0.65
SHH-204ENST00000441114 ACADMP11310 421 aa19.12■□□□□ 0.65
SHH-204ENST00000441114 PCK1P35558 622 aa19.12■□□□□ 0.65
SHH-204ENST00000441114 ACVRL1P37023 503 aa19.12■□□□□ 0.65
SHH-204ENST00000441114 P2RY2P41231 377 aa19.12■□□□□ 0.65
SHH-204ENST00000441114 MAPKAPK2P49137 400 aa19.12■□□□□ 0.65
SHH-204ENST00000441114 BYSLQ13895 437 aaKnown RBP19.12■□□□□ 0.65
SHH-204ENST00000441114 HNRNPA1L2Q32P51 320 aaKnown RBP19.12■□□□□ 0.65
SHH-204ENST00000441114 MAP7D1Q3KQU3 841 aa19.12■□□□□ 0.65
SHH-204ENST00000441114 KCNT1Q5JUK3 1230 aa19.12■□□□□ 0.65
SHH-204ENST00000441114 LINGO4Q6UY18 593 aa19.12■□□□□ 0.65
SHH-204ENST00000441114 CYP4V2Q6ZWL3 525 aaPredicted RBP19.12■□□□□ 0.65
SHH-204ENST00000441114 ZNF354CQ86Y25 554 aa19.12■□□□□ 0.65
SHH-204ENST00000441114 CPNE8Q86YQ8 564 aa19.12■□□□□ 0.65
SHH-204ENST00000441114 PANX2Q96RD6 677 aa19.12■□□□□ 0.65
SHH-204ENST00000441114 C2orf49Q9BVC5 232 aaPredicted RBP19.12■□□□□ 0.65
SHH-204ENST00000441114 CATSPERBQ9H7T0 1116 aa19.12■□□□□ 0.65
SHH-204ENST00000441114 OSGEPQ9NPF4 335 aa19.12■□□□□ 0.65
SHH-204ENST00000441114 UVRAGQ9P2Y5 699 aa19.12■□□□□ 0.65
SHH-204ENST00000441114 VPS51Q9UID3 782 aa19.12■□□□□ 0.65
SHH-204ENST00000441114 PLXND1Q9Y4D7 1925 aa19.12■□□□□ 0.65
SHH-204ENST00000441114 SPAG17Q6Q759 2223 aa19.11■□□□□ 0.65
SHH-204ENST00000441114 EDDM13A0A1B0GTR0 161 aa19.11■□□□□ 0.65
SHH-204ENST00000441114 BNIP3LO60238 219 aa19.11■□□□□ 0.65
SHH-204ENST00000441114 MT-CO1P00395 513 aa19.11■□□□□ 0.65
SHH-204ENST00000441114 VAV1P15498 845 aa19.11■□□□□ 0.65
SHH-204ENST00000441114 IL1R2P27930 398 aa19.11■□□□□ 0.65
SHH-204ENST00000441114 GJC1P36383 396 aa19.11■□□□□ 0.65
SHH-204ENST00000441114 MAGEA1P43355 309 aa19.11■□□□□ 0.65
SHH-204ENST00000441114 SEMA3BQ13214 749 aa19.11■□□□□ 0.65
SHH-204ENST00000441114 PLK5Q496M5 336 aa19.11■□□□□ 0.65
SHH-204ENST00000441114 ZNF783Q6ZMS7 281 aa19.11■□□□□ 0.65
SHH-204ENST00000441114 DCLK2Q8N568 766 aa19.11■□□□□ 0.65
SHH-204ENST00000441114 DEFB119Q8N690 84 aa19.11■□□□□ 0.65
SHH-204ENST00000441114 NIPA2Q8N8Q9 360 aa19.11■□□□□ 0.65
SHH-204ENST00000441114 DCAF4L2Q8NA75 395 aa19.11■□□□□ 0.65
SHH-204ENST00000441114 ATP11CQ8NB49 1132 aa19.11■□□□□ 0.65
SHH-204ENST00000441114 KDM1BQ8NB78 822 aa19.11■□□□□ 0.65
SHH-204ENST00000441114 SLC35G2Q8TBE7 412 aa19.11■□□□□ 0.65
SHH-204ENST00000441114 DUSP15Q9H1R2 295 aaPredicted RBP19.11■□□□□ 0.65
SHH-204ENST00000441114 MBD1Q9UIS9 605 aaPredicted RBP19.11■□□□□ 0.65
SHH-204ENST00000441114 GMEB2Q9UKD1 530 aa19.11■□□□□ 0.65
SHH-204ENST00000441114 ABCA7Q8IZY2 2146 aa19.1■□□□□ 0.65
SHH-204ENST00000441114 RALGAPA1Q6GYQ0 2036 aa19.1■□□□□ 0.65
SHH-204ENST00000441114 TARSL2A2RTX5 802 aaKnown RBP19.1■□□□□ 0.65
SHH-204ENST00000441114 SOWAHDA6NJG2 315 aa19.1■□□□□ 0.65
SHH-204ENST00000441114 RAMP2O60895 175 aa19.1■□□□□ 0.65
SHH-204ENST00000441114 ZNF217O75362 1048 aa19.1■□□□□ 0.65
SHH-204ENST00000441114 RARAP10276 462 aa19.1■□□□□ 0.65
SHH-204ENST00000441114 GOT1P17174 413 aa19.1■□□□□ 0.65
SHH-204ENST00000441114 CDC25BP30305 580 aa19.1■□□□□ 0.65
SHH-204ENST00000441114 CYLC1P35663 651 aaPredicted RBP19.1■□□□□ 0.65
SHH-204ENST00000441114 MESDQ14696 234 aa19.1■□□□□ 0.65
SHH-204ENST00000441114 POLD3Q15054 466 aaPredicted RBP19.1■□□□□ 0.65
SHH-204ENST00000441114 DLG2Q15700 870 aa19.1■□□□□ 0.65
SHH-204ENST00000441114 ELF2Q15723 593 aa19.1■□□□□ 0.65
SHH-204ENST00000441114 C9orf64Q5T6V5 341 aa19.1■□□□□ 0.65
SHH-204ENST00000441114 TXNRD3NBQ6F5E7 133 aa19.1■□□□□ 0.65
SHH-204ENST00000441114 LAIR1Q6GTX8 287 aa19.1■□□□□ 0.65
SHH-204ENST00000441114 STK40Q8N2I9 435 aa19.1■□□□□ 0.65
SHH-204ENST00000441114 SH2D3CQ8N5H7 860 aa19.1■□□□□ 0.65
SHH-204ENST00000441114 RTL3Q8N8U3 475 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms