RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 LRSAM1Q6UWE0 723 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 MMAAQ8IVH4 418 aaKnown RBP14.11□□□□□ -0.15
LTBR-202ENST00000440421 STK40Q8N2I9 435 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 GANCQ8TET4 914 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 CENPIQ92674 756 aaPredicted RBP14.11□□□□□ -0.15
LTBR-202ENST00000440421 FOXJ1Q92949 421 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 EDEM3Q9BZQ6 932 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 ZYG11BQ9C0D3 744 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 FSCN3Q9NQT6 498 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 OR12D3Q9UGF7 316 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 CEP250Q9BV73 2442 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 A0A0D9SEW6 157 aa14.1□□□□□ -0.15
LTBR-202ENST00000440421 FAM72CH0Y354 149 aa14.1□□□□□ -0.15
LTBR-202ENST00000440421 DDX3XO00571 662 aaKnown RBP eCLIP14.1□□□□□ -0.15
LTBR-202ENST00000440421 SNAP91O60641 907 aa14.1□□□□□ -0.15
LTBR-202ENST00000440421 RNASEH1O60930 286 aaKnown RBP14.1□□□□□ -0.15
LTBR-202ENST00000440421 ACSL1P33121 698 aa14.1□□□□□ -0.15
LTBR-202ENST00000440421 DPP6P42658 865 aa14.1□□□□□ -0.15
LTBR-202ENST00000440421 PSMD8P48556 350 aa14.1□□□□□ -0.15
LTBR-202ENST00000440421 ZNF143P52747 638 aaPredicted RBP14.1□□□□□ -0.15
LTBR-202ENST00000440421 ZBTB16Q05516 673 aa14.1□□□□□ -0.15
LTBR-202ENST00000440421 ARID5BQ14865 1188 aa14.1□□□□□ -0.15
LTBR-202ENST00000440421 CST6Q15828 149 aa14.1□□□□□ -0.15
LTBR-202ENST00000440421 DUOXA1Q1HG43 343 aa14.1□□□□□ -0.15
LTBR-202ENST00000440421 TDRD12Q587J7 1177 aaKnown RBP14.1□□□□□ -0.15
LTBR-202ENST00000440421 PPP1R15BQ5SWA1 713 aa14.1□□□□□ -0.15
LTBR-202ENST00000440421 C6orf118Q5T5N4 469 aa14.1□□□□□ -0.15
LTBR-202ENST00000440421 FAM72AQ5TYM5 149 aa14.1□□□□□ -0.15
LTBR-202ENST00000440421 IL31Q6EBC2 164 aa14.1□□□□□ -0.15
LTBR-202ENST00000440421 FAM72DQ6L9T8 149 aa14.1□□□□□ -0.15
LTBR-202ENST00000440421 RWDD4Q6NW29 188 aaKnown RBP14.1□□□□□ -0.15
LTBR-202ENST00000440421 SETD3Q86TU7 594 aaPredicted RBP14.1□□□□□ -0.15
LTBR-202ENST00000440421 FAM72BQ86X60 149 aa14.1□□□□□ -0.15
LTBR-202ENST00000440421 DRC7Q8IY82 874 aa14.1□□□□□ -0.15
LTBR-202ENST00000440421 PTPRN2Q92932 1015 aa14.1□□□□□ -0.15
LTBR-202ENST00000440421 PSMB7Q99436 277 aa14.1□□□□□ -0.15
LTBR-202ENST00000440421 SPON2Q9BUD6 331 aa14.1□□□□□ -0.15
LTBR-202ENST00000440421 NUSAP1Q9BXS6 441 aaKnown RBP14.1□□□□□ -0.15
LTBR-202ENST00000440421 MIR1-1HGQ9H1L0 117 aa14.1□□□□□ -0.15
LTBR-202ENST00000440421 PABPC3Q9H361 631 aaKnown RBP14.1□□□□□ -0.15
LTBR-202ENST00000440421 EVLQ9UI08 416 aaPredicted RBP14.1□□□□□ -0.15
LTBR-202ENST00000440421 A0A1W2PQJ5 194 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 C4orf47A7E2U8 309 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 METTL12A8MUP2 240 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 MID1O15344 667 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 BNIP3LO60238 219 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 FTLP02792 175 aaPredicted RBP14.09□□□□□ -0.15
LTBR-202ENST00000440421 PLEKP08567 350 aaPredicted RBP14.09□□□□□ -0.15
LTBR-202ENST00000440421 KCNA4P22459 653 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 MAPK8P45983 427 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 LIMK1P53667 647 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 KRT83P78385 493 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 OGDHQ02218 1023 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 MAMLD1Q13495 774 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 DLG2Q15700 870 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 WDR45BQ5MNZ6 344 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 DCAF12L1Q5VU92 463 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 PEAR1Q5VY43 1037 aaPredicted RBP14.09□□□□□ -0.15
LTBR-202ENST00000440421 PPP1R2P3Q6NXS1 205 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 SLC23A3Q6PIS1 610 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 LINGO4Q6UY18 593 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 ERMP1Q7Z2K6 904 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 SLFN11Q7Z7L1 901 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 ATP11CQ8NB49 1132 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 CADM4Q8NFZ8 388 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 OR7D4Q8NG98 312 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 FRS2Q8WU20 508 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 SNX19Q92543 992 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 VCPIP1Q96JH7 1222 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 FAM129BQ96TA1 746 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 CNPY3Q9BT09 278 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 C2orf49Q9BVC5 232 aaPredicted RBP14.09□□□□□ -0.15
LTBR-202ENST00000440421 XPO4Q9C0E2 1151 aaKnown RBP14.09□□□□□ -0.15
LTBR-202ENST00000440421 BTBD1Q9H0C5 482 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 OSBPL2Q9H1P3 480 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 TSPY26PQ9H489 355 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 PARVAQ9NVD7 372 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 FBXL12Q9NXK8 326 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 PPARGC1AQ9UBK2 798 aaKnown RBP14.09□□□□□ -0.15
LTBR-202ENST00000440421 ZNF212Q9UDV6 495 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 SERGEFQ9UGK8 458 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 VPS51Q9UID3 782 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 NCKAP1Q9Y2A7 1128 aa14.09□□□□□ -0.15
LTBR-202ENST00000440421 NYNRINQ9P2P1 1898 aaKnown RBP14.09□□□□□ -0.15
LTBR-202ENST00000440421 A0A1W2PP55 124 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 FAM47DPA6NHR8 397 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 K7ERQ8 282 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 CBX4O00257 560 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 ATP9BO43861 1147 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 RNASEH2AO75792 299 aaKnown RBP14.08□□□□□ -0.16
LTBR-202ENST00000440421 LRIG2O94898 1065 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 SEMA4FO95754 770 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 MT-CO1P00395 513 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 IL1BP01584 269 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 C7P10643 843 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 ENGP17813 658 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 GLDCP23378 1020 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 SLC8A1P32418 973 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 HOXD12P35452 270 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 GFPT1Q06210 699 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms