RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 TMEM79Q9BSE2 394 aa4.14□□□□□ -1.75
LSM1P1-201ENST00000438629 NPLQ9BXD5 320 aaPredicted RBP4.14□□□□□ -1.75
LSM1P1-201ENST00000438629 HDHD5Q9BXW7 423 aa4.14□□□□□ -1.75
LSM1P1-201ENST00000438629 ARHGAP39Q9C0H5 1083 aa4.14□□□□□ -1.75
LSM1P1-201ENST00000438629 TAOK3Q9H2K8 898 aa4.14□□□□□ -1.75
LSM1P1-201ENST00000438629 MLXIPLQ9NP71 852 aa4.14□□□□□ -1.75
LSM1P1-201ENST00000438629 WASH6PQ9NQA3 447 aa4.14□□□□□ -1.75
LSM1P1-201ENST00000438629 SAGE1Q9NXZ1 904 aa4.14□□□□□ -1.75
LSM1P1-201ENST00000438629 C9orf78Q9NZ63 289 aaPredicted RBP4.14□□□□□ -1.75
LSM1P1-201ENST00000438629 AFG3L2Q9Y4W6 797 aa4.14□□□□□ -1.75
LSM1P1-201ENST00000438629 ZNF804BA4D1E1 1349 aa4.14□□□□□ -1.75
LSM1P1-201ENST00000438629 KIR2DS5A0A0G2JLQ3 304 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 KIR2DS3K7RE56 304 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 STRNO43815 780 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 TLR2O60603 784 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 UGDHO60701 494 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 CNOT3O75175 753 aaKnown RBP4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 PYGLP06737 847 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 ARSAP15289 507 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 PRKCHP24723 683 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 CNTFP26441 200 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 AVPR2P30518 371 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 PSMC2P35998 433 aaKnown RBP4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 PGM1P36871 562 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 SKIV2L2P42285 1042 aaKnown RBP4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 MMP13P45452 471 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 CYP2J2P51589 502 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 MRPS21P82921 87 aaKnown RBP4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 POU5F1BQ06416 359 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 MAPK7Q13164 816 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 BYSLQ13895 437 aaKnown RBP4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 CCDC142Q17RM4 750 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 SUPT20HL1Q3ZLR7 823 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 C5orf22Q49AR2 442 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 PXDC1Q5TGL8 231 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 LRRC8DQ7L1W4 858 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 CPOQ8IVL8 374 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 BRSK2Q8IWQ3 736 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 FAM185AQ8N0U4 392 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 PAF1Q8N7H5 531 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 SLC44A5Q8NCS7 719 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 MPLKIPQ8TAP9 179 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 NAP1L4Q99733 375 aaKnown RBP4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 PIMREGQ9BSJ6 248 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 HERC2P3Q9BVR0 1158 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 SCNM1Q9BWG6 230 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 TMEM160Q9NX00 188 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 ALKBH4Q9NXW9 302 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 TUBA8Q9NY65 449 aaPredicted RBP4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 CNOT7Q9UIV1 285 aaKnown RBP4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 AGO2Q9UKV8 859 aaKnown RBP4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 DHDHQ9UQ10 334 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 LAMP3Q9UQV4 416 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 ZMYM2Q9UBW7 1377 aa4.13□□□□□ -1.75
LSM1P1-201ENST00000438629 ARHGEF17Q96PE2 2063 aaPredicted RBP4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 A0A1B0GVC2 190 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 SH2D7A6NKC9 451 aaPredicted RBP4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 CGB1A6NKQ9 187 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 PEX12O00623 359 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 HBP1O60381 514 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 TULP3O75386 442 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 POLBP06746 335 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 GJC1P36383 396 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 ABCG1P45844 678 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 PLCD1P51178 756 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 SSBP2P81877 361 aaPredicted RBP4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 RHAGQ02094 409 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 ALG10Q5BKT4 473 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 ALG10BQ5I7T1 473 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 KIAA1755Q5JYT7 1200 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 FAM171A1Q5VUB5 890 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 AAGABQ6PD74 315 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 ZNF793Q6ZN11 406 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 MRPL10Q7Z7H8 261 aaKnown RBP4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 IL17REQ8NFR9 667 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 C16orf52Q8NHV5 167 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 DENND1AQ8TEH3 1009 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 STAMQ92783 540 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 HVCN1Q96D96 273 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 FRG2BQ96QU4 278 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 TRMOQ9BU70 441 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 IFT27Q9BW83 186 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 GPR63Q9BZJ6 419 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 RNF146Q9NTX7 359 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 TMEM248Q9NWD8 314 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 FBXO40Q9UH90 709 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 UTS2RQ9UKP6 389 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 BTBD3Q9Y2F9 522 aa4.12□□□□□ -1.75
LSM1P1-201ENST00000438629 TRBV5-3A0A0A0MS03 114 aa4.11□□□□□ -1.75
LSM1P1-201ENST00000438629 GOLGA6L10A0A0M3HER8 536 aa4.11□□□□□ -1.75
LSM1P1-201ENST00000438629 TCRBV7S3A2A0A539 114 aa4.11□□□□□ -1.75
LSM1P1-201ENST00000438629 OR6C68A6NDL8 312 aa4.11□□□□□ -1.75
LSM1P1-201ENST00000438629 FOXO6A8MYZ6 492 aa4.11□□□□□ -1.75
LSM1P1-201ENST00000438629 RHODO00212 210 aa4.11□□□□□ -1.75
LSM1P1-201ENST00000438629 FGBP02675 491 aa4.11□□□□□ -1.75
LSM1P1-201ENST00000438629 FCGR2AP12318 317 aa4.11□□□□□ -1.75
LSM1P1-201ENST00000438629 LYL1P12980 280 aa4.11□□□□□ -1.75
LSM1P1-201ENST00000438629 KLRC2P26717 231 aa4.11□□□□□ -1.75
LSM1P1-201ENST00000438629 HNF1BP35680 557 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms