RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 PRELPP51888 382 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 TERF1P54274 439 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 MYL5Q02045 173 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 TNIP1Q15025 636 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 CDC37Q16543 378 aaPredicted RBP6.74□□□□□ -1.33
SPEN-202ENST00000438066 KCNMB1Q16558 191 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 ZIK1Q3SY52 487 aaPredicted RBP6.74□□□□□ -1.33
SPEN-202ENST00000438066 MGAT5BQ3V5L5 792 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 ZMAT1Q5H9K5 638 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 ANKS1BQ7Z6G8 1248 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 IQUBQ8NA54 791 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 MLKLQ8NB16 471 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 RNF169Q8NCN4 708 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 CUL5Q93034 780 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 SMARCE1Q969G3 411 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 CCDC34Q96HJ3 373 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 AK8Q96MA6 479 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 MOGAT1Q96PD6 335 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 GSDMAQ96QA5 445 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 TREX2Q9BQ50 279 aaPredicted RBP6.74□□□□□ -1.33
SPEN-202ENST00000438066 REEP2Q9BRK0 252 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 TLR10Q9BXR5 811 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 CCSER1Q9C0I3 900 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 TMEM39BQ9GZU3 492 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 MYOZ2Q9NPC6 264 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 G6PC2Q9NQR9 355 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 FSCN3Q9NQT6 498 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 C19orf53Q9UNZ5 99 aaPredicted RBP6.74□□□□□ -1.33
SPEN-202ENST00000438066 DERAQ9Y315 318 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 UTRNP46939 3433 aa6.74□□□□□ -1.33
SPEN-202ENST00000438066 PHIPQ8WWQ0 1821 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 UBE2QL1A1L167 161 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 TBKBP1A7MCY6 615 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 PP2D1A8MPX8 630 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 SMTNL1A8MU46 457 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 GOLGA6L6A8MZA4 724 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 ZSCAN9O15535 394 aaPredicted RBP6.73□□□□□ -1.33
SPEN-202ENST00000438066 DOK2O60496 412 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 CCNT1O60563 726 aaKnown RBP6.73□□□□□ -1.33
SPEN-202ENST00000438066 ADAM23O75077 832 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 SMC2O95347 1197 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 LMNAP02545 664 aaKnown RBP6.73□□□□□ -1.33
SPEN-202ENST00000438066 PLA2G1BP04054 148 aaKnown RBP6.73□□□□□ -1.33
SPEN-202ENST00000438066 TPM3P06753 285 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 FURINP09958 794 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 YY1P25490 414 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 SLC5A2P31639 672 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 COPB2P35606 906 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 LILRA4P59901 499 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 UBE2SQ16763 222 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 LETM2Q2VYF4 491 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 KIAA1755Q5JYT7 1200 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 ATXN7L2Q5T6C5 722 aaPredicted RBP6.73□□□□□ -1.33
SPEN-202ENST00000438066 ISM2Q6H9L7 571 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 SLC30A10Q6XR72 485 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 ADGRE4PQ86SQ3 457 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 TMEFF1Q8IYR6 380 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 BPIFB1Q8TDL5 484 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 LRRC15Q8TF66 581 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 TEPSINQ96N21 525 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 MTMR9Q96QG7 549 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 SLC46A2Q9BY10 475 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 GLT8D2Q9H1C3 349 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 ABHD16BQ9H3Z7 469 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 TTC12Q9H892 705 aaPredicted RBP6.73□□□□□ -1.33
SPEN-202ENST00000438066 VEZTQ9HBM0 779 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 DNAJC16Q9Y2G8 782 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 PMF1-BGLAPU3KQ54 211 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 PAPPA2Q9BXP8 1791 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 FAM90A18PA6NE21 464 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 FAM90A16PA6NEW6 464 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 FAM90A9PA6NNJ1 464 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 FAM90A5PA8MXJ8 464 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 STX16-NPEPL1H3BU86 382 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 STX16O14662 325 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 HOXA3O43365 443 aaPredicted RBP6.73□□□□□ -1.33
SPEN-202ENST00000438066 SLC37A4O43826 429 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 SRGAP2O75044 1071 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 PRSS23O95084 383 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 TDP2O95551 362 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 CYP1A1P04798 512 aaPredicted RBP6.73□□□□□ -1.33
SPEN-202ENST00000438066 FAM90A15PP0C7V4 464 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 FAM90A14PP0C7W9 464 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 RPL13P26373 211 aaKnown RBP6.73□□□□□ -1.33
SPEN-202ENST00000438066 CDC25AP30304 524 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 HOXD12P35452 270 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 MRPL12P52815 198 aaKnown RBP6.73□□□□□ -1.33
SPEN-202ENST00000438066 TCF15Q12870 199 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 ATP1A4Q13733 1029 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 ERV3-1Q14264 604 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 KARSQ15046 597 aaKnown RBP6.73□□□□□ -1.33
SPEN-202ENST00000438066 BMT2Q1RMZ1 405 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 FAM133BQ5BKY9 247 aaKnown RBP6.73□□□□□ -1.33
SPEN-202ENST00000438066 ABLIM2Q6H8Q1 611 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 MPZL3Q6UWV2 235 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 ZSWIM9Q86XI8 627 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 SPC24Q8NBT2 197 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 ACER1Q8TDN7 264 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 ADAMTS15Q8TE58 950 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms