RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	KRTAP4-6	Q9BYQ5	205 aa		6.42	□□□□□ -1.38
ECHDC1-208	ENST00000436638	SLITRK6	Q9H5Y7	841 aa		6.42	□□□□□ -1.38
ECHDC1-208	ENST00000436638	CCDC86	Q9H6F5	360 aa	Known RBP	6.42	□□□□□ -1.38
ECHDC1-208	ENST00000436638	C12orf49	Q9H741	205 aa		6.42	□□□□□ -1.38
ECHDC1-208	ENST00000436638	TLR8	Q9NR97	1041 aa	Known RBP	6.42	□□□□□ -1.38
ECHDC1-208	ENST00000436638	ABHD10	Q9NUJ1	306 aa		6.42	□□□□□ -1.38
ECHDC1-208	ENST00000436638	CLEC1B	Q9P126	229 aa		6.42	□□□□□ -1.38
ECHDC1-208	ENST00000436638	THEG	Q9P2T0	379 aa		6.42	□□□□□ -1.38
ECHDC1-208	ENST00000436638	NOCT	Q9UK39	431 aa	Known RBP	6.42	□□□□□ -1.38
ECHDC1-208	ENST00000436638	SLC30A1	Q9Y6M5	507 aa		6.42	□□□□□ -1.38
ECHDC1-208	ENST00000436638	MYO9B	Q13459	2157 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	PLXNA3	P51805	1871 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	SSU72P8	A0A1W2PR75	194 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638		A6NCN8	305 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	TRIM64	A6NGJ6	449 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	TRIM64B	A6NI03	449 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	CAPN9	O14815	690 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	MUSK	O15146	869 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	MBTPS2	O43462	519 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	SNX2	O60749	519 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	FBXO24	O75426	580 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	ERLIN1	O75477	346 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	SKAP2	O75563	359 aa	Predicted RBP	6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	ZBED1	O96006	694 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	CALB1	P05937	261 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	USP17L7	P0C7H9	530 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	DES	P17661	470 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	RAB6A	P20340	208 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	DDX6	P26196	483 aa	Known RBP eCLIP	6.41	□□□□□ -1.38	2e-7	■■■□□ 18.3
ECHDC1-208	ENST00000436638	ARNT	P27540	789 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	HNRNPH3	P31942	346 aa	Known RBP	6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	GBP2	P32456	591 aa	Predicted RBP	6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	CDH5	P33151	784 aa	Predicted RBP	6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	RDX	P35241	583 aa	Known RBP	6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	CYLC1	P35663	651 aa	Predicted RBP	6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	LTBR	P36941	435 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	EIF4A3	P38919	411 aa	Known RBP	6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	KIF11	P52732	1056 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	EPHB1	P54762	984 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	NOMO3	P69849	1222 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	NTHL1	P78549	312 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	FMO1	Q01740	532 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	GOLGA8F	Q08AF8	430 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	GOLGA8DP	Q0D2H9	430 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	ADIG	Q0VDE8	80 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	TAF10	Q12962	218 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	PDCL	Q13371	301 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	CLEC16A	Q2KHT3	1053 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	LEXM	Q3ZCV2	418 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	SPDYC	Q5MJ68	293 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	C10orf76	Q5T2E6	689 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	GPR158	Q5T848	1215 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	BTBD8	Q5XKL5	378 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	ACAD10	Q6JQN1	1059 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	PMF1	Q6P1K2	205 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	PAOX	Q6QHF9	649 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	TOGARAM2	Q6ZUX3	1019 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	BTN2A1	Q7KYR7	527 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	RSRC2	Q7L4I2	434 aa	Known RBP	6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	OTOP3	Q7RTS5	596 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	ZNF571	Q7Z3V5	609 aa	Predicted RBP	6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	MAATS1	Q7Z4T9	603 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	IRF2BP2	Q7Z5L9	587 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	ZDHHC17	Q8IUH5	632 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	SMRP1	Q8NCR6	262 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	SCAMP5	Q8TAC9	235 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	KIAA1524	Q8TCG1	905 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	RNF139	Q8WU17	664 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	IPCEF1	Q8WWN9	437 aa	Predicted RBP	6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	RSAD2	Q8WXG1	361 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	CPA5	Q8WXQ8	436 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	OVCA2	Q8WZ82	227 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	IRGQ	Q8WZA9	623 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	DDX1	Q92499	740 aa	Known RBP	6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	ARHGEF2	Q92974	986 aa	Known RBP	6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	FAM149B1	Q96BN6	582 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	ZNF707	Q96C28	371 aa	Predicted RBP	6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	ACSF2	Q96CM8	615 aa	Predicted RBP	6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	C18orf8	Q96DM3	657 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	WDR89	Q96FK6	387 aa	Predicted RBP	6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	TRMT2B	Q96GJ1	504 aa	Known RBP	6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	PANX2	Q96RD6	677 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	NELL2	Q99435	816 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	DNAJC7	Q99615	494 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	SH3GL3	Q99963	347 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	ZSWIM1	Q9BR11	485 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	TRIM62	Q9BVG3	475 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	ULBP1	Q9BZM6	244 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	TRIM8	Q9BZR9	551 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	S1PR5	Q9H228	398 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	TRPC7	Q9HCX4	862 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	WDR6	Q9NNW5	1121 aa	Known RBP	6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	LUC7L	Q9NQ29	371 aa	Known RBP	6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	CNGB3	Q9NQW8	809 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	HCFC1R1	Q9NWW0	138 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	SPATA7	Q9P0W8	599 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	GMIP	Q9P107	970 aa		6.41	□□□□□ -1.38
ECHDC1-208	ENST00000436638	WDR35	Q9P2L0	1181 aa		6.41	□□□□□ -1.38

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