RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 GJB4Q9NTQ9 266 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 VHLP40337 213 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 AGKQ53H12 422 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 PCNX4Q63HM2 1172 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 NDUFAF1Q9Y375 327 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 A2ML1A8K2U0 1454 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 TMCC2O75069 709 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 SLC35G4P0C7Q5 338 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 CYP2F1P24903 491 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 HECTD3Q5T447 861 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 TCEAL6Q6IPX3 200 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 CATSPERZQ9NTU4 200 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 FAM153AQ9UHL3 310 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 TFPIP10646 304 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 IL12RB1P42701 662 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 RAB25P57735 213 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 ADIGQ0VDE8 80 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 SLC13A5Q86YT5 568 aaPredicted RBP11.37□□□□□ -0.59
SCN4A-201ENST00000435607 SYTL5Q8TDW5 730 aaPredicted RBP11.37□□□□□ -0.59
SCN4A-201ENST00000435607 ATP8B4Q8TF62 1192 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 C1QTNF1Q9BXJ1 281 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 SLC28A3Q9HAS3 691 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 TPD52L2O43399 206 aaKnown RBP11.37□□□□□ -0.59
SCN4A-201ENST00000435607 APODP05090 189 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 ACADSP16219 412 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 PRKAG1P54619 331 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 SULT2A1Q06520 285 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 FAXCQ5TGI0 409 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 USP50Q70EL3 339 aaPredicted RBP11.37□□□□□ -0.59
SCN4A-201ENST00000435607 TXNRD3Q86VQ6 643 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 ATCAYQ86WG3 371 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 FAM126BQ8IXS8 530 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 ADSSL1Q8N142 457 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 PHC3Q8NDX5 983 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 FDXACB1Q9BRP7 624 aaPredicted RBP11.37□□□□□ -0.59
SCN4A-201ENST00000435607 JMJD4Q9H9V9 463 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 PXMP2Q9NR77 195 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 ALKBH4Q9NXW9 302 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 IRAK3Q9Y616 596 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 TEX46H3BTG2 121 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 CPA3P15088 417 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 GNSP15586 552 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 OMPP47874 163 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 BCAP31P51572 246 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 PUS10Q3MIT2 529 aaKnown RBP11.37□□□□□ -0.59
SCN4A-201ENST00000435607 SLC39A12Q504Y0 691 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 XKR4Q5GH76 650 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 SPANXN2Q5MJ10 180 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 ATXN7L2Q5T6C5 722 aaPredicted RBP11.37□□□□□ -0.59
SCN4A-201ENST00000435607 PARGQ86W56 976 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 APLFQ8IW19 511 aaPredicted RBP11.37□□□□□ -0.59
SCN4A-201ENST00000435607 ZNF563Q8TA94 476 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 TMEM120AQ9BXJ8 343 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 LAMC1P11047 1609 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 ISM1B1AKI9 464 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 H3BM21 787 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 PSMB9P28065 219 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 MMP13P45452 471 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 CDH8P55286 799 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 PTPN11Q06124 597 aaPredicted RBP11.37□□□□□ -0.59
SCN4A-201ENST00000435607 EIF3MQ7L2H7 374 aaKnown RBP11.37□□□□□ -0.59
SCN4A-201ENST00000435607 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.37□□□□□ -0.59
SCN4A-201ENST00000435607 MARCH10Q8NA82 808 aaPredicted RBP11.37□□□□□ -0.59
SCN4A-201ENST00000435607 REEP1Q9H902 201 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 ZDHHC4Q9NPG8 344 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 WHRNQ9P202 907 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 GIT1Q9Y2X7 761 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 SCN2BO60939 215 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 ATP6V1B1P15313 513 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 ATP5F1P24539 256 aaPredicted RBP11.37□□□□□ -0.59
SCN4A-201ENST00000435607 HERVK_113P62684 666 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 AP5B1Q2VPB7 878 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 FERD3LQ96RJ6 166 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 KLF6Q99612 283 aaPredicted RBP11.37□□□□□ -0.59
SCN4A-201ENST00000435607 LRRC1Q9BTT6 524 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 CMTM6Q9NX76 183 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 MARCH2Q9P0N8 246 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 MFHAS1Q9Y4C4 1052 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 NFASCO94856 1347 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 A0A087X1B8 175 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 RASGRP1O95267 797 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 ARF5P84085 180 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 MCL1Q07820 350 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 DEFB115Q30KQ5 88 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 OAFQ86UD1 273 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 ITCHQ96J02 903 aa11.37□□□□□ -0.59
SCN4A-201ENST00000435607 INTS10Q9NVR2 710 aaKnown RBP11.37□□□□□ -0.59
SCN4A-201ENST00000435607 ADGRL2O95490 1459 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 O00370 1275 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 FGF10O15520 208 aaPredicted RBP11.36□□□□□ -0.59
SCN4A-201ENST00000435607 EPS8Q12929 822 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 HEXDCQ8WVB3 486 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 SCAF8Q9UPN6 1271 aaKnown RBP11.36□□□□□ -0.59
SCN4A-201ENST00000435607 ATMINO43313 823 aaPredicted RBP11.36□□□□□ -0.59
SCN4A-201ENST00000435607 BMT2Q1RMZ1 405 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 INO80DQ53TQ3 878 aaPredicted RBP11.36□□□□□ -0.59
SCN4A-201ENST00000435607 ANGPT4Q9Y264 503 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 ZSCAN5CA6NGD5 496 aaPredicted RBP11.36□□□□□ -0.59
SCN4A-201ENST00000435607 ITGA2P17301 1181 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 HDCP19113 662 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms