RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 SMAD1Q15797 465 aaKnown RBP18.99■□□□□ 0.63
CLK1-205ENST00000434813 TIGD5Q53EQ6 642 aa18.99■□□□□ 0.63
CLK1-205ENST00000434813 PPM1JQ5JR12 505 aa18.99■□□□□ 0.63
CLK1-205ENST00000434813 PM20D1Q6GTS8 502 aa18.99■□□□□ 0.63
CLK1-205ENST00000434813 CXCL17Q6UXB2 119 aa18.99■□□□□ 0.63
CLK1-205ENST00000434813 TAC4Q86UU9 113 aa18.99■□□□□ 0.63
CLK1-205ENST00000434813 C10orf107Q8IVU9 208 aa18.99■□□□□ 0.63
CLK1-205ENST00000434813 DCLK2Q8N568 766 aa18.99■□□□□ 0.63
CLK1-205ENST00000434813 RILPQ96NA2 401 aa18.99■□□□□ 0.63
CLK1-205ENST00000434813 PGLYRP2Q96PD5 576 aa18.99■□□□□ 0.63
CLK1-205ENST00000434813 RHOBTB2Q9BYZ6 727 aa18.99■□□□□ 0.63
CLK1-205ENST00000434813 TMEM216Q9P0N5 145 aa18.99■□□□□ 0.63
CLK1-205ENST00000434813 OR12D3Q9UGF7 316 aa18.99■□□□□ 0.63
CLK1-205ENST00000434813 LRRC42Q9Y546 428 aa18.99■□□□□ 0.63
CLK1-205ENST00000434813 CASTOR2A6NHX0 329 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 B2RBV5 119 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 CTSHP09668 335 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 PTDSS1P48651 473 aaKnown RBP18.98■□□□□ 0.63
CLK1-205ENST00000434813 ALDH18A1P54886 795 aaKnown RBP18.98■□□□□ 0.63
CLK1-205ENST00000434813 ZNF33AQ06730 810 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 KPNB1Q14974 876 aaKnown RBP18.98■□□□□ 0.63
CLK1-205ENST00000434813 CMPK2Q5EBM0 449 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 ACSBG2Q5FVE4 666 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 DCLRE1AQ6PJP8 1040 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 STRA8Q7Z7C7 330 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 CMC1Q7Z7K0 106 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 PAAF1Q9BRP4 392 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 SNX10Q9Y5X0 201 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 MAGEB16A2A368 324 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 SPECC1L-ADORA2AF8WAN1 911 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 ALOX15P16050 662 aaPredicted RBP18.98■□□□□ 0.63
CLK1-205ENST00000434813 AOC1P19801 751 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 PGM1P36871 562 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 CPA2P48052 419 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 NPY2RP49146 381 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 CDK7P50613 346 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 CACNB2Q08289 660 aaPredicted RBP18.98■□□□□ 0.63
CLK1-205ENST00000434813 RCN2Q14257 317 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 TAF11Q15544 211 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 DNAL1Q4LDG9 190 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 RABGAP1LQ5R372 815 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 FAM171BQ6P995 826 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 MRPL10Q7Z7H8 261 aaKnown RBP18.98■□□□□ 0.63
CLK1-205ENST00000434813 KLHDC8BQ8IXV7 354 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 RBM15BQ8NDT2 890 aaKnown RBP18.98■□□□□ 0.63
CLK1-205ENST00000434813 PPP4R1Q8TF05 950 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 TEKT5Q96M29 485 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 SORT1Q99523 831 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 IL22Q9GZX6 179 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 UPF3AQ9H1J1 476 aaKnown RBP18.98■□□□□ 0.63
CLK1-205ENST00000434813 BATF3Q9NR55 127 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 STOML1Q9UBI4 398 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 PATJQ8NI35 1801 aa18.98■□□□□ 0.63
CLK1-205ENST00000434813 ARHGAP42A6NI28 874 aa18.97■□□□□ 0.63
CLK1-205ENST00000434813 AP3B1O00203 1094 aa18.97■□□□□ 0.63
CLK1-205ENST00000434813 CHRNA1P02708 482 aa18.97■□□□□ 0.63
CLK1-205ENST00000434813 MYCNP04198 464 aaPredicted RBP18.97■□□□□ 0.63
CLK1-205ENST00000434813 CSE1LP55060 971 aaKnown RBP18.97■□□□□ 0.63
CLK1-205ENST00000434813 MGAT3Q09327 533 aa18.97■□□□□ 0.63
CLK1-205ENST00000434813 GDF6Q6KF10 455 aaPredicted RBP18.97■□□□□ 0.63
CLK1-205ENST00000434813 FSTL4Q6MZW2 842 aa18.97■□□□□ 0.63
CLK1-205ENST00000434813 GPATCH11Q8N954 259 aa18.97■□□□□ 0.63
CLK1-205ENST00000434813 OR6Y1Q8NGX8 325 aa18.97■□□□□ 0.63
CLK1-205ENST00000434813 ZSCAN18Q8TBC5 510 aaPredicted RBP18.97■□□□□ 0.63
CLK1-205ENST00000434813 ACBD6Q9BR61 282 aa18.97■□□□□ 0.63
CLK1-205ENST00000434813 DMAP1Q9NPF5 467 aaPredicted RBP18.97■□□□□ 0.63
CLK1-205ENST00000434813 DNAJC28Q9NX36 388 aa18.97■□□□□ 0.63
CLK1-205ENST00000434813 PLA2G4CQ9UP65 541 aa18.97■□□□□ 0.63
CLK1-205ENST00000434813 PRR5-ARHGAP8B1AHC4 643 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 LUC7L3O95232 432 aaKnown RBP18.96■□□□□ 0.63
CLK1-205ENST00000434813 CYP11A1P05108 521 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 MPOP05164 745 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 RALBP11234 206 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 CYP2C18P33260 490 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 GCKP35557 465 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 HARS2P49590 506 aaKnown RBP18.96■□□□□ 0.63
CLK1-205ENST00000434813 ARHGAP8P85298 464 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 TRIM32Q13049 653 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 CERCAMQ5T4B2 595 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 BEND5Q7L4P6 421 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 CLEC14AQ86T13 490 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 SERINC5Q86VE9 423 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 KCNMB4Q86W47 210 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 FBXO27Q8NI29 283 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 DQX1Q8TE96 717 aaKnown RBP18.96■□□□□ 0.63
CLK1-205ENST00000434813 WDR60Q8WVS4 1066 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 MFSD3Q96ES6 412 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 NAF1Q96HR8 494 aaKnown RBP18.96■□□□□ 0.63
CLK1-205ENST00000434813 AGAP2Q99490 1192 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 MCMBPQ9BTE3 642 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 TRIM62Q9BVG3 475 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 OSBPL2Q9H1P3 480 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 C1orf21Q9H246 121 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 SOX13Q9UN79 622 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 NEU3Q9UQ49 428 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 GPR182O15218 404 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 TIMM44O43615 452 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 IGLV3-25P01717 112 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 CPA3P15088 417 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 DNAJB2P25686 324 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms