RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 FAM96AQ9H5X1 160 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 S100A14Q9HCY8 104 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 C20orf96Q9NUD7 363 aaPredicted RBP12.06□□□□□ -0.48
CD44-209ENST00000433892 ADAM28Q9UKQ2 775 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 PCDHB12Q9Y5F1 795 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 MBLAC1A4D2B0 266 aaPredicted RBP12.06□□□□□ -0.48
CD44-209ENST00000433892 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.06□□□□□ -0.48
CD44-209ENST00000433892 ZBTB14O43829 449 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 FKBP6O75344 327 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 F2P00734 622 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 USP17L7P0C7H9 530 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 UBTFL6P0CB48 400 aaPredicted RBP12.06□□□□□ -0.48
CD44-209ENST00000433892 FAM200BP0CF97 657 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 MYL4P12829 197 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 CYP2B6P20813 491 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 CDK7P50613 346 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 PGGT1BP53609 377 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 PPIDQ08752 370 aaKnown RBP12.06□□□□□ -0.48
CD44-209ENST00000433892 PCBP1Q15365 356 aaKnown RBP eCLIP12.06□□□□□ -0.48
CD44-209ENST00000433892 LRRC36Q1X8D7 754 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 SLC9B1Q4ZJI4 515 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 CFAP157Q5JU67 520 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 LDLRAD1Q5T700 205 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 IQSEC1Q6DN90 963 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 FRMD7Q6ZUT3 714 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 RAPH1Q70E73 1250 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 PDZD4Q76G19 769 aaPredicted RBP12.06□□□□□ -0.48
CD44-209ENST00000433892 DEFB107AQ8IZN7 70 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 SMG8Q8ND04 991 aaKnown RBP12.06□□□□□ -0.48
CD44-209ENST00000433892 PHC3Q8NDX5 983 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 HIPK4Q8NE63 616 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 URGCPQ8TCY9 931 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 SLC26A7Q8TE54 656 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 GTF3C2Q8WUA4 911 aaPredicted RBP12.06□□□□□ -0.48
CD44-209ENST00000433892 ISL2Q96A47 359 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 DDX50Q9BQ39 737 aaKnown RBP12.06□□□□□ -0.48
CD44-209ENST00000433892 ECSITQ9BQ95 431 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 MLPHQ9BV36 600 aaPredicted RBP12.06□□□□□ -0.48
CD44-209ENST00000433892 CASS4Q9NQ75 786 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 DDIT4Q9NX09 232 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 DDX43Q9NXZ2 648 aaKnown RBP12.06□□□□□ -0.48
CD44-209ENST00000433892 DNAJB4Q9UDY4 337 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 CDH22Q9UJ99 828 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 TIMM13Q9Y5L4 95 aaPredicted RBP12.06□□□□□ -0.48
CD44-209ENST00000433892 SBF1O95248 1867 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 CCDC189A1A4V9 331 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 PTGESO14684 152 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 CCNT2O60583 730 aaKnown RBP12.05□□□□□ -0.48
CD44-209ENST00000433892 SMIM24O75264 130 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 LTFP02788 710 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 C2P06681 752 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 NFKB1P19838 968 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 SAT1P21673 171 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 CACNA2D1P54289 1103 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 CDC16Q13042 620 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 SEMA3BQ13214 749 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 MPP3Q13368 585 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 CUL3Q13618 768 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 CCNIQ14094 377 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 PPP2R5DQ14738 602 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 KCTD11Q693B1 232 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 KCNMB4Q86W47 210 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 HPS6Q86YV9 775 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 NPLOC4Q8TAT6 608 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 MAPK15Q8TD08 544 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 ACTRT2Q8TDY3 377 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 EDEM1Q92611 657 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 SLC9A7Q96T83 725 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 CDH19Q9H159 772 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 NMRAL1Q9HBL8 299 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 CRTAC1Q9NQ79 661 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 IARS2Q9NSE4 1012 aaKnown RBP12.05□□□□□ -0.48
CD44-209ENST00000433892 TMEM30AQ9NV96 361 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 FBXW11Q9UKB1 542 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 CDY2AQ9Y6F7 541 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 CDY1Q9Y6F8 540 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 NUP205Q92621 2012 aa12.05□□□□□ -0.48
CD44-209ENST00000433892 MAGEA13PA6NCF6 341 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 GABRDO14764 452 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 AP1G2O75843 785 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 CD1EP15812 388 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 ITGAXP20702 1163 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 CRABP2P29373 138 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 DAOAP59103 153 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 ASPHQ12797 758 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 GRB14Q14449 540 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 TCHHL1Q5QJ38 904 aaPredicted RBP12.04□□□□□ -0.48
CD44-209ENST00000433892 TWF2Q6IBS0 349 aaKnown RBP12.04□□□□□ -0.48
CD44-209ENST00000433892 PGM2L1Q6PCE3 622 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 EPGNQ6UW88 154 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 RNF111Q6ZNA4 994 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 PPP1R36Q96LQ0 422 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 OR52B2Q96RD2 323 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 SMOQ99835 787 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 GBA3Q9H227 469 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 ZNF408Q9H9D4 720 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 PDCD11Q14690 1871 aaKnown RBP12.04□□□□□ -0.48
CD44-209ENST00000433892 CCL15-CCL14A0A0B4J2E2 113 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 MYBPHLA2RUH7 354 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 MEIS3P2A8K0S8 358 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms