RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 TSTD1Q8NFU3 115 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 KCNV2Q8TDN2 545 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 RNF25Q96BH1 459 aaPredicted RBP14.93□□□□□ -0.02
SGCE-204ENST00000428696 CELF6Q96J87 481 aaKnown RBP14.93□□□□□ -0.02
SGCE-204ENST00000428696 LMLNQ96KR4 655 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 PCDH18Q9HCL0 1135 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 TMEM248Q9NWD8 314 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 BCCIPQ9P287 314 aaKnown RBP eCLIP14.93□□□□□ -0.02
SGCE-204ENST00000428696 SLCO3A1Q9UIG8 710 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 SLC25A13Q9UJS0 675 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 HCN2Q9UL51 889 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 MMP17Q9ULZ9 603 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 ERVW-1Q9UQF0 538 aa14.93□□□□□ -0.02
SGCE-204ENST00000428696 ILVBLA1L0T0 632 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 LRRD1A4D1F6 860 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 FGF10O15520 208 aaPredicted RBP14.92□□□□□ -0.02
SGCE-204ENST00000428696 GALR2O43603 387 aaPredicted RBP14.92□□□□□ -0.02
SGCE-204ENST00000428696 SNAP91O60641 907 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 KRT1P04264 644 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 ASLP04424 464 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 CD48P09326 243 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 ERCC2P18074 760 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 GLDCP23378 1020 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 IL12RB1P42701 662 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 MAPKAPK2P49137 400 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 STARD3Q14849 445 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 RNF43Q68DV7 783 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 POLNQ7Z5Q5 900 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 ATP11CQ8NB49 1132 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 TTC17Q96AE7 1141 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 CSPG4P5Q96PW8 444 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 IER2Q9BTL4 223 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 C2orf49Q9BVC5 232 aaPredicted RBP14.92□□□□□ -0.02
SGCE-204ENST00000428696 MAK16Q9BXY0 300 aaKnown RBP14.92□□□□□ -0.02
SGCE-204ENST00000428696 TSGA10Q9BZW7 698 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 POLMQ9NP87 494 aaPredicted RBP14.92□□□□□ -0.02
SGCE-204ENST00000428696 DONSONQ9NYP3 566 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 THAP10Q9P2Z0 257 aaPredicted RBP14.92□□□□□ -0.02
SGCE-204ENST00000428696 MIA3Q5JRA6 1907 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 TCRBV21S2A2A0A5A6 115 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 DFFAO00273 331 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 PJA2O43164 708 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 KRT86O43790 486 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 ADAM23O75077 832 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 PALMO75781 387 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 HNRNPLP14866 589 aaKnown RBP eCLIP14.92□□□□□ -0.02
SGCE-204ENST00000428696 PRKCHP24723 683 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 DNA2P51530 1060 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 DGKEP52429 567 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 PLK1P53350 603 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 HADHBP55084 474 aaKnown RBP14.92□□□□□ -0.02
SGCE-204ENST00000428696 SULT2A1Q06520 285 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 SEMA3BQ13214 749 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 LLGL1Q15334 1064 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 CRY1Q16526 586 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 DPYSL2Q16555 572 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 HSF5Q4G112 596 aaPredicted RBP14.92□□□□□ -0.02
SGCE-204ENST00000428696 ARTNQ5T4W7 220 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 ANO7Q6IWH7 933 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 TMCO3Q6UWJ1 677 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 TMEM92Q6UXU6 159 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 NLRP14Q86W24 1093 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 HMGB4Q8WW32 186 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 RAPGEF5Q92565 580 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 MAGEH1Q9H213 219 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 MTG2Q9H4K7 406 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.92□□□□□ -0.02
SGCE-204ENST00000428696 HCN4Q9Y3Q4 1203 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 OR51B4Q9Y5P0 310 aa14.92□□□□□ -0.02
SGCE-204ENST00000428696 BTNL10A8MVZ5 291 aa14.91□□□□□ -0.02
SGCE-204ENST00000428696 TTC34A8MYJ7 566 aa14.91□□□□□ -0.02
SGCE-204ENST00000428696 ALDH1A2O94788 518 aa14.91□□□□□ -0.02
SGCE-204ENST00000428696 KDELR1P24390 212 aa14.91□□□□□ -0.02
SGCE-204ENST00000428696 HTR7P34969 479 aa14.91□□□□□ -0.02
SGCE-204ENST00000428696 ETFBP38117 255 aa14.91□□□□□ -0.02
SGCE-204ENST00000428696 PDK2Q15119 407 aa14.91□□□□□ -0.02
SGCE-204ENST00000428696 C11orf63Q6NUN7 778 aa14.91□□□□□ -0.02
SGCE-204ENST00000428696 KIAA1211LQ6NV74 962 aa14.91□□□□□ -0.02
SGCE-204ENST00000428696 ZNF783Q6ZMS7 281 aa14.91□□□□□ -0.02
SGCE-204ENST00000428696 CACUL1Q86Y37 369 aa14.91□□□□□ -0.02
SGCE-204ENST00000428696 CCDC50Q8IVM0 306 aa14.91□□□□□ -0.02
SGCE-204ENST00000428696 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.91□□□□□ -0.02
SGCE-204ENST00000428696 ALG14Q96F25 216 aa14.91□□□□□ -0.02
SGCE-204ENST00000428696 HMCESQ96FZ2 354 aa14.91□□□□□ -0.02
SGCE-204ENST00000428696 CALR3Q96L12 384 aaKnown RBP14.91□□□□□ -0.02
SGCE-204ENST00000428696 RETREG1Q9H6L5 497 aa14.91□□□□□ -0.02
SGCE-204ENST00000428696 VPS51Q9UID3 782 aa14.91□□□□□ -0.02
SGCE-204ENST00000428696 NEU3Q9UQ49 428 aa14.91□□□□□ -0.02
SGCE-204ENST00000428696 MFHAS1Q9Y4C4 1052 aa14.91□□□□□ -0.02
SGCE-204ENST00000428696 GRID2IPA4D2P6 1211 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 RASA4BC9J798 803 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 K7ERQ8 282 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 NPC1O15118 1278 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 RASA4O43374 803 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 APBB3O95704 486 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 FTCDO95954 541 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 MT-CO1P00395 513 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 SRPRAP08240 638 aaKnown RBP14.9□□□□□ -0.02
SGCE-204ENST00000428696 COL9A1P20849 921 aa14.9□□□□□ -0.02
SGCE-204ENST00000428696 HCAR3P49019 387 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms