RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 TDRD5Q8NAT2 981 aaKnown RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 SMG7Q92540 1137 aaKnown RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 GFM2Q969S9 779 aaKnown RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 LENG9Q96B70 501 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 RNFT2Q96EX2 444 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 ATP13A3Q9H7F0 1226 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 LRRC40Q9H9A6 602 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 CERS4Q9HA82 394 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 CYLDQ9NQC7 956 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 GNPTGQ9UJJ9 305 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 TMCO1Q9UM00 188 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 MAPRE3Q9UPY8 281 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 ADGRG1Q9Y653 693 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 NFASCO94856 1347 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 CFAP73A6NFT4 308 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 PHF2O75151 1096 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 VIPP01282 170 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 ANXA6P08133 673 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 RBP1P09455 135 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 ALAS2P22557 587 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 VARSP26640 1264 aaKnown RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 ADCYAP1R1P41586 468 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 TUBP50607 506 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 BEX3Q00994 111 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 GRM3Q14832 879 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 SMTNL2Q2TAL5 461 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 NAIF1Q69YI7 327 aaPredicted RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 EMBQ6PCB8 327 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 BHLHB9Q6PI77 547 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 KDELC1Q6UW63 502 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 TAF8Q7Z7C8 310 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 CDR2LQ86X02 465 aaPredicted RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 VSTM4Q8IW00 320 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 KIAA2013Q8IYS2 634 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 OR10H5Q8NGA6 315 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 ELMO1Q92556 727 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 HDAC2Q92769 488 aaKnown RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 PROX1Q92786 737 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 ZBTB10Q96DT7 871 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 THAP11Q96EK4 314 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 OLFM3Q96PB7 478 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 MTMR9Q96QG7 549 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 KCNK16Q96T55 309 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 TRABDQ9H4I3 376 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 SLC32A1Q9H598 525 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.83□□□□□ -1.48
HERC4-206ENST00000427635 MRPL39Q9NYK5 338 aaKnown RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 DCDC2Q9UHG0 476 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 DUSP12Q9UNI6 340 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 A0A0J9YVX5 310 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 TMEM191CA6NGB0 347 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 CAPN14A8MX76 684 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 OR6B1O95007 311 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 ZNF682O95780 498 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 CPA3P15088 417 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 PTPN1P18031 435 aaKnown RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 SEMA3AQ14563 771 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 DPCR1Q3MIW9 517 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 DNAL1Q4LDG9 190 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 HYIQ5T013 277 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 BROXQ5VW32 411 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 CCDC81Q6ZN84 652 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 RTL3Q8N8U3 475 aaKnown RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 HJURPQ8NCD3 748 aaPredicted RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 TSTD1Q8NFU3 115 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 CAPNS2Q96L46 248 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 SLC9A7Q96T83 725 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 SH2D3AQ9BRG2 576 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 MTMR12Q9C0I1 747 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 RIBC2Q9H4K1 309 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 LDAHQ9H6V9 325 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 ELAC1Q9H777 363 aaKnown RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 ABCC13Q9NSE7 274 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 V9GYQ6 96 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 CES2O00748 559 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 ZBTB39O15060 712 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 CLEC3AO75596 197 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 HSPA9P38646 679 aaKnown RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 ELK3P41970 407 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 RAP1GAPP47736 663 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 PSMD8P48556 350 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 PLOD1Q02809 727 aaPredicted RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 FPGSQ05932 587 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 FOXM1Q08050 763 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 TRIP10Q15642 601 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 TYW3Q6IPR3 259 aaKnown RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 DENND1BQ6P3S1 775 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 MFSD7Q6UXD7 560 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 VASH1Q7L8A9 365 aaPredicted RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 PPIL6Q8IXY8 311 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 BEND7Q8N7W2 519 aaPredicted RBP5.83□□□□□ -1.48
HERC4-206ENST00000427635 TRPV3Q8NET8 790 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 CD99L2Q8TCZ2 262 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 UPF1Q92900 1129 aaKnown RBP eCLIP5.83□□□□□ -1.48
HERC4-206ENST00000427635 SPATA5L1Q9BVQ7 753 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 RNF121Q9H920 327 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 TBC1D14Q9P2M4 693 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 SEPT3Q9UH03 358 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 BARX2Q9UMQ3 279 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms