RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 PCDHGA4Q9Y5G9 962 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 MYL12AP19105 171 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 ADCYAP1R1P41586 468 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 XRCC4Q13426 336 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 FSCN1Q16658 493 aaKnown RBP18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 CACTIN-AS1Q8N1I8 211 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 PIK3R5Q8WYR1 880 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 REXO4Q9GZR2 422 aaKnown RBP18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 SEMA4BQ9NPR2 832 aaPredicted RBP18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 ARL15Q9NXU5 204 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 RABGEF1Q9UJ41 708 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 CENPXA8MT69 81 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 TPP1O14773 563 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 COX7A2P14406 83 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 PIK3R1P27986 724 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 S100A3P33764 101 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 PURAQ00577 322 aaKnown RBP18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 SLC34A1Q06495 639 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 PROX1Q92786 737 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 POLR1EQ9GZS1 481 aaKnown RBP18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 INVSQ9Y283 1065 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 SERPINH1P50454 418 aaKnown RBP18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 HK2P52789 917 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 CNTN2Q02246 1040 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 ZNF844Q08AG5 666 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 USP45Q70EL2 814 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 CDRT15Q96T59 188 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 SPATA2Q9UM82 520 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 MYL12BO14950 172 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 DCXO43602 365 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 CYP2A13Q16696 494 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 ZBTB10Q96DT7 871 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 DNAJC18Q9H819 358 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 ABCC13Q9NSE7 274 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 ETNK2Q9NVF9 386 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 PHGDHO43175 533 aaKnown RBP18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 OAZ1P54368 228 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 DET1Q7L5Y6 550 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 TRAPPC5Q8IUR0 188 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 RHBGQ9H310 441 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 ABHD16BQ9H3Z7 469 aa18.24■□□□□ 0.51
ARHGEF28-203ENST00000426542 ADM5C9JUS6 153 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 CXCL11O14625 94 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 ERVK-9P63128 1117 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 CLYBLQ8N0X4 340 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 ENTPD4Q9Y227 616 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 FAM50BQ9Y247 325 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 C1orf232A0A0U1RR37 186 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 TUFMP49411 452 aaKnown RBP18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 CCR4P51679 360 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 POLR2LP62875 67 aaKnown RBP18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 FAM126AQ9BYI3 521 aaPredicted RBP18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 UMODL1Q5DID0 1318 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 EML1O00423 815 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 TBC1D12O60347 775 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 JAK1P23458 1154 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 NEK3P51956 506 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 NPNTQ6UXI9 565 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 ZNF605Q86T29 641 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 SLC41A1Q8IVJ1 513 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 SETD9Q8NE22 299 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 ZFYVE1Q9HBF4 777 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 MANSC4A6NHS7 340 aaPredicted RBP18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 TRDMT1O14717 391 aaKnown RBP18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 EPN2O95208 641 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 LBPP18428 481 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 ME2P23368 584 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 CDK7P50613 346 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 BEX3Q00994 111 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 GNA13Q14344 377 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 RRP1BQ14684 758 aaKnown RBP18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 MAP1SQ66K74 1059 aaPredicted RBP18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 C16orf46Q6P387 395 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 COPG2Q9UBF2 871 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 ENOPH1Q9UHY7 261 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 SALL1Q9NSC2 1324 aa18.23■□□□□ 0.51
ARHGEF28-203ENST00000426542 APOC4-APOC2K7ER74 178 aa18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 OR6A2O95222 327 aa18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 APOC2P02655 101 aa18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 TSPAN19P0C672 248 aa18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 EIF4BP23588 611 aaKnown RBP18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 ATP1A4Q13733 1029 aa18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 ACAP1Q15027 740 aa18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 HDAC7Q8WUI4 952 aa18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 SLC35C1Q96A29 364 aa18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 DUSP9Q99956 384 aaKnown RBP18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 CHST7Q9NS84 486 aa18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 TPRKBQ9Y3C4 175 aa18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 PTGES3LE9PB15 166 aa18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 F8VP50 259 aa18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 SMIM22K7EJ46 135 aa18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 KDELR1P24390 212 aa18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 TKTP29401 623 aaKnown RBP18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 IFNGR2P38484 337 aa18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 CDK16Q00536 496 aa18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 PARP6Q2NL67 630 aa18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 SNX30Q5VWJ9 437 aa18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 FBXL19Q6PCT2 694 aa18.22■□□□□ 0.51
ARHGEF28-203ENST00000426542 ZCCHC9Q8N567 271 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms