RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 DAAM1Q9Y4D1 1078 aa13.1□□□□□ -0.31
GPC1-204ENST00000426280 LAMA1P25391 3075 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 SIGLEC16A6NMB1 481 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 C10orf142B7Z368 130 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 DDX3XO00571 662 aaKnown RBP eCLIP13.09□□□□□ -0.315e-8■■■□□ 17.3
GPC1-204ENST00000426280 MID1O15344 667 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 ATMINO43313 823 aaPredicted RBP13.09□□□□□ -0.31
GPC1-204ENST00000426280 CLDN11O75508 207 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 CD160O95971 181 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 GYPCP04921 128 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 ACADMP11310 421 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 KRT3P12035 628 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 FERP16591 822 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 SLC8A1P32418 973 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 PTPN9P43378 593 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 NSFP46459 744 aaKnown RBP13.09□□□□□ -0.31
GPC1-204ENST00000426280 GSCP56915 257 aaPredicted RBP13.09□□□□□ -0.31
GPC1-204ENST00000426280 ST8SIA6P61647 398 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 DUOXA1Q1HG43 343 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 FIGNQ5HY92 759 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 PPM1JQ5JR12 505 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 KCNT1Q5JUK3 1230 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 MANEALQ5VSG8 457 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 LINGO4Q6UY18 593 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 RGL4Q8IZJ4 473 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 ARFGAP1Q8N6T3 406 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 FAM172AQ8WUF8 416 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 HAPLN3Q96S86 360 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 ANP32EQ9BTT0 268 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 TRIM7Q9C029 511 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 PABPC3Q9H361 631 aaKnown RBP13.09□□□□□ -0.31
GPC1-204ENST00000426280 EIF2B4Q9UI10 523 aaKnown RBP13.09□□□□□ -0.31
GPC1-204ENST00000426280 SLC6A14Q9UN76 642 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 NEU3Q9UQ49 428 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 PCDH15Q96QU1 1955 aa13.09□□□□□ -0.31
GPC1-204ENST00000426280 A0A1W2PP55 124 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 TARSL2A2RTX5 802 aaKnown RBP13.08□□□□□ -0.32
GPC1-204ENST00000426280 WNT9AO14904 365 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 CCP110O43303 1012 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 ATP9BO43861 1147 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 ZNF821O75541 412 aaPredicted RBP13.08□□□□□ -0.32
GPC1-204ENST00000426280 ZMPSTE24O75844 475 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 MOCS3O95396 460 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 TPM3P06753 285 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 SERPINF2P08697 491 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 SRCP12931 536 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 TNFAIP3P21580 790 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 GPD1P21695 349 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 SDC4P31431 198 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 ZNF252P-AS1Q0IIN9 211 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 SLC12A1Q13621 1099 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 NUMA1Q14980 2115 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 DLG2Q15700 870 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 CST6Q15828 149 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 UAP1L1Q3KQV9 507 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 POM121L1PQ3SYA9 428 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 TTC39BQ5VTQ0 682 aaPredicted RBP13.08□□□□□ -0.32
GPC1-204ENST00000426280 ZNF776Q68DI1 518 aaPredicted RBP13.08□□□□□ -0.32
GPC1-204ENST00000426280 LAYNQ6UX15 382 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 SND1Q7KZF4 910 aaKnown RBP eCLIP13.08□□□□□ -0.32
GPC1-204ENST00000426280 VSTM4Q8IW00 320 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 CCDC117Q8IWD4 279 aaPredicted RBP13.08□□□□□ -0.32
GPC1-204ENST00000426280 ZCCHC9Q8N567 271 aaKnown RBP13.08□□□□□ -0.32
GPC1-204ENST00000426280 ZNF557Q8N988 423 aaPredicted RBP13.08□□□□□ -0.32
GPC1-204ENST00000426280 KDM1BQ8NB78 822 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 MSANTD4Q8NCY6 345 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 C3orf20Q8ND61 904 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 CADM4Q8NFZ8 388 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 VOPP1Q96AW1 172 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 BIRC7Q96CA5 298 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 SELENOOQ9BVL4 669 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 MIR1-1HGQ9H1L0 117 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 IL21RQ9HBE5 538 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 FBXL12Q9NXK8 326 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 AIPL1Q9NZN9 384 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 VPS51Q9UID3 782 aa13.08□□□□□ -0.32
GPC1-204ENST00000426280 EDDM13A0A1B0GTR0 161 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 FOXD2O60548 495 aaPredicted RBP13.07□□□□□ -0.32
GPC1-204ENST00000426280 KCNK5O95279 499 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 DNTTP04053 509 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 IGHV4-34P06331 123 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 CTSLP07711 333 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 RHOCP08134 193 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 PLEKP08567 350 aaPredicted RBP13.07□□□□□ -0.32
GPC1-204ENST00000426280 SDHBP21912 280 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 KCNA4P22459 653 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 OXTRP30559 389 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 CASP14P31944 242 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 DRD3P35462 400 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 ACVRL1P37023 503 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 PRKCIP41743 596 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 PSMD8P48556 350 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 ZNF75DP51815 510 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 GALCP54803 685 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 C1QBPQ07021 282 aaKnown RBP13.07□□□□□ -0.32
GPC1-204ENST00000426280 ASIC2Q16515 512 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 ACCSLQ4AC99 568 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 N4BP2L1Q5TBK1 243 aaPredicted RBP13.07□□□□□ -0.32
GPC1-204ENST00000426280 SFMBT2Q5VUG0 894 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 HGSNATQ68CP4 663 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms