RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 TAOK3Q9H2K8 898 aa7□□□□□ -1.29
HMGB1P32-201ENST00000425971 CDCP1Q9H5V8 836 aa7□□□□□ -1.29
HMGB1P32-201ENST00000425971 SNX15Q9NRS6 342 aa7□□□□□ -1.29
HMGB1P32-201ENST00000425971 PCDHB2Q9Y5E7 798 aa7□□□□□ -1.29
HMGB1P32-201ENST00000425971 EYSQ5T1H1 3165 aa7□□□□□ -1.29
HMGB1P32-201ENST00000425971 LAMA2P24043 3122 aaKnown RBP6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 COL5A3P25940 1745 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 INSRP06213 1382 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 KDRP35968 1356 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 MYH14Q7Z406 1995 aaKnown RBP6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 VWA3AA6NCI4 1184 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 H0YGN5 161 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 SUV39H1O43463 412 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 PRAMEF2O60811 474 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 MBD4O95243 580 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 TMIGD3P0DMS9 266 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 MYCLP12524 364 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 ZNF37AP17032 561 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 ENGP17813 658 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 CYP2C18P33260 490 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 MPLP40238 635 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 GRIA3P42263 894 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 TAS2R50P59544 299 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 GPC5P78333 572 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 TLE3Q04726 772 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 RNASELQ05823 741 aaKnown RBP6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 LMAN2Q12907 356 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 MAPK7Q13164 816 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 CBFBQ13951 182 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 LSM12Q3MHD2 195 aaKnown RBP6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 ATG16L1Q676U5 607 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 DENND2CQ68D51 928 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 SFTPA1Q8IWL2 248 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 LCORLQ8N3X6 602 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 PTGR2Q8N8N7 351 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 FAM71DQ8N9W8 422 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 PIGSQ96S52 555 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 NPAS1Q99742 590 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 ARHGAP39Q9C0H5 1083 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 ZHX3Q9H4I2 956 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 PLEKHA2Q9HB19 425 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 RNF186Q9NXI6 227 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 BAG5Q9UL15 447 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 ADAMTS5Q9UNA0 930 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 REXO2Q9Y3B8 237 aaKnown RBP6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 LAMB4A4D0S4 1761 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 PAPPA2Q9BXP8 1791 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 TTC21AQ8NDW8 1320 aa6.99□□□□□ -1.29
HMGB1P32-201ENST00000425971 COL11A2P13942 1736 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 CCDC196A0A1B0GTZ2 297 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 AGAP5A6NIR3 686 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 TSPAN3O60637 253 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 CELF2O95319 508 aaKnown RBP6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 CSF1P09603 554 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 NPSP0C0P6 89 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 ELFN1P0C7U0 828 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 MATN1P21941 496 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 FPR3P25089 353 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 ELF1P32519 619 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 GRK5P34947 590 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 ADRA1BP35368 520 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 PLA2G5P39877 138 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 NR1H2P55055 460 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 RAE1P78406 368 aaKnown RBP6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 CCDC15Q0P6D6 951 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 MPP3Q13368 585 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 RSRC2Q7L4I2 434 aaKnown RBP6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 PCGF5Q86SE9 256 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 LINC01465Q8N7H1 131 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 FSIP1Q8NA03 581 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 ABHD11Q8NFV4 315 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 SH3RF3Q8TEJ3 882 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 EDC3Q96F86 508 aaKnown RBP6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 SNX18Q96RF0 628 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 HERC2P3Q9BVR0 1158 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 CINPQ9BW66 212 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 AGXT2Q9BYV1 514 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 MAP3K20Q9NYL2 800 aaKnown RBP6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 SLC12A4Q9UP95 1085 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 NRXN2Q9P2S2 1712 aa6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 USP42Q9H9J4 1324 aaKnown RBP6.98□□□□□ -1.29
HMGB1P32-201ENST00000425971 GRID2IPA4D2P6 1211 aa6.97□□□□□ -1.29
HMGB1P32-201ENST00000425971 LINC00473A8K010 186 aa6.97□□□□□ -1.29
HMGB1P32-201ENST00000425971 SEPT4O43236 478 aa6.97□□□□□ -1.29
HMGB1P32-201ENST00000425971 HNRNPRO43390 633 aaKnown RBP6.97□□□□□ -1.29
HMGB1P32-201ENST00000425971 ESRRBO95718 433 aa6.97□□□□□ -1.29
HMGB1P32-201ENST00000425971 TTLL1O95922 423 aa6.97□□□□□ -1.29
HMGB1P32-201ENST00000425971 PEPDP12955 493 aa6.97□□□□□ -1.29
HMGB1P32-201ENST00000425971 ATP1A3P13637 1013 aa6.97□□□□□ -1.29
HMGB1P32-201ENST00000425971 TM4SF1P30408 202 aa6.97□□□□□ -1.29
HMGB1P32-201ENST00000425971 AVPR1BP47901 424 aa6.97□□□□□ -1.29
HMGB1P32-201ENST00000425971 RXRGP48443 463 aa6.97□□□□□ -1.29
HMGB1P32-201ENST00000425971 RCAN1P53805 252 aa6.97□□□□□ -1.29
HMGB1P32-201ENST00000425971 MRPS35P82673 323 aaKnown RBP6.97□□□□□ -1.29
HMGB1P32-201ENST00000425971 TBC1D25Q3MII6 688 aa6.97□□□□□ -1.29
HMGB1P32-201ENST00000425971 RNASE12Q5GAN4 147 aaKnown RBP6.97□□□□□ -1.29
HMGB1P32-201ENST00000425971 ANO7Q6IWH7 933 aa6.97□□□□□ -1.29
HMGB1P32-201ENST00000425971 SYNE3Q6ZMZ3 975 aa6.97□□□□□ -1.29
HMGB1P32-201ENST00000425971 C1orf122Q6ZSJ8 110 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms