RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 PSMD11O00231 422 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 HTRA2O43464 458 aaPredicted RBP11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 S100BP04271 92 aaPredicted RBP11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 MAP4P27816 1152 aaKnown RBP11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 PCYT1AP49585 367 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 ARPC4P59998 168 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 SLC25A11Q02978 314 aaKnown RBP11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 PTK2BQ14289 1009 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 C15orf59Q2T9L4 293 aaPredicted RBP11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 GK5Q6ZS86 529 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 CARM1Q86X55 608 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 PHF13Q86YI8 300 aaPredicted RBP11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 TMCO5AQ8N6Q1 288 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 COPG2Q9UBF2 871 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 KCNU1A8MYU2 1149 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 AGRPO00253 132 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 VAPBO95292 243 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 PTPN2P17706 415 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 MAGP20916 626 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 EEF1B2P24534 225 aaKnown RBP11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 MIPP30301 263 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 GABRB2P47870 512 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 CDC42EP5Q6NZY7 148 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 BBS12Q6ZW61 710 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 PIGZQ86VD9 579 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 IGFN1Q86VF2 1251 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 LDHDQ86WU2 507 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 SIX5Q8N196 739 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 CLIP4Q8N3C7 705 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 CHPT1Q8WUD6 406 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 SGCDQ92629 289 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 INO80BQ9C086 356 aaPredicted RBP11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 CEP44Q9C0F1 390 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 HIPK3Q9H422 1215 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 SMOXQ9NWM0 555 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 CYTH4Q9UIA0 394 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 SYNPO2Q9UMS6 1093 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 V9GYQ6 96 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 C9JVG2 144 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 MAN1A2O60476 641 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 CNOT3O75175 753 aaKnown RBP11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 GH2P01242 217 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 MATN1P21941 496 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 MZF1P28698 734 aaPredicted RBP11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 FPGSQ05932 587 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 HMBOX1Q6NT76 420 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 ARCQ7LC44 396 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 GPD1LQ8N335 351 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 CBR4Q8N4T8 237 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 EFHD2Q96C19 240 aaPredicted RBP11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 ZMAT2Q96NC0 199 aaKnown RBP11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 CENPOQ9BU64 300 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 PNPLA3Q9NST1 481 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 DDX56Q9NY93 547 aaKnown RBP11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 PCDHGA3Q9Y5H0 932 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 SQORQ9Y6N5 450 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 E7ENX8 843 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 EIF2S1P05198 315 aaKnown RBP11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 RAP1GAPP47736 663 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 TPTEP56180 551 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 C1QBPQ07021 282 aaKnown RBP11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 DMP1Q13316 513 aaPredicted RBP11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 BFSP2Q13515 415 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 RPS27LQ71UM5 84 aaKnown RBP11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 SLC4A11Q8NBS3 891 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 CAPSLQ8WWF8 208 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 NSMCE3Q96MG7 304 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 PEBP4Q96S96 227 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 NPLQ9BXD5 320 aaPredicted RBP11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 FRMD8Q9BZ67 464 aaPredicted RBP11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 XPNPEP3Q9NQH7 507 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 CDH7Q9ULB5 785 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 TIMM22Q9Y584 194 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 SCN9AQ15858 1988 aa11.51□□□□□ -0.57
SEC61A1-202ENST00000424880 RGSL1A5PLK6 1076 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 ZNF701M0R085 212 aaPredicted RBP11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 AQP9O43315 295 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 HMGCRP04035 888 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 HLA-DOAP06340 250 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 TKTP29401 623 aaKnown RBP11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 NR4A2P43354 598 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 TRPC1P48995 793 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 ZBED5Q49AG3 693 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 PTPN20Q4JDL3 420 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 FSCBQ5H9T9 825 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 TREML2Q5T2D2 321 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 KCTD8Q6ZWB6 473 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 CHSY3Q70JA7 882 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 SLCO4A1Q96BD0 722 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 MFSD14AQ96MC6 490 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 CDH19Q9H159 772 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 STN1Q9H668 368 aaKnown RBP11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 GID8Q9NWU2 228 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 DUS2Q9NX74 493 aaKnown RBP11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 ACOT8O14734 319 aa11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 MYCLP12524 364 aaPredicted RBP11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 POLR2IP36954 125 aaKnown RBP11.5□□□□□ -0.57
SEC61A1-202ENST00000424880 NME5P56597 212 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms