RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 CLSTN3Q9BQT9 956 aa5.06□□□□□ -1.6
CDC42EP3-202ENST00000422687 RNF26Q9BY78 433 aaPredicted RBP5.06□□□□□ -1.6
CDC42EP3-202ENST00000422687 NFKBIZQ9BYH8 718 aa5.06□□□□□ -1.6
CDC42EP3-202ENST00000422687 CNTD2Q9H8S5 307 aa5.06□□□□□ -1.6
CDC42EP3-202ENST00000422687 KCNMB3Q9NPA1 279 aa5.06□□□□□ -1.6
CDC42EP3-202ENST00000422687 TRPV5Q9NQA5 729 aa5.06□□□□□ -1.6
CDC42EP3-202ENST00000422687 XPNPEP1Q9NQW7 623 aa5.06□□□□□ -1.6
CDC42EP3-202ENST00000422687 SH3GLB2Q9NR46 395 aa5.06□□□□□ -1.6
CDC42EP3-202ENST00000422687 SAE1Q9UBE0 346 aaPredicted RBP5.06□□□□□ -1.6
CDC42EP3-202ENST00000422687 Q9UFV3 132 aa5.06□□□□□ -1.6
CDC42EP3-202ENST00000422687 DNAI1Q9UI46 699 aa5.06□□□□□ -1.6
CDC42EP3-202ENST00000422687 ADAM28Q9UKQ2 775 aa5.06□□□□□ -1.6
CDC42EP3-202ENST00000422687 AKAP13Q12802 2813 aa5.06□□□□□ -1.6
CDC42EP3-202ENST00000422687 PATJQ8NI35 1801 aa5.06□□□□□ -1.6
CDC42EP3-202ENST00000422687 LAMA5O15230 3695 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 SMG1Q96Q15 3661 aaKnown RBP5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 COL4A3Q01955 1670 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 SETXQ7Z333 2677 aaKnown RBP5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 SF3B1O75533 1304 aaKnown RBP eCLIP5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 A0A1B0GUA9 196 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 NCAM2O15394 837 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 ADAM12O43184 909 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 DKC1O60832 514 aaKnown RBP eCLIP5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 FSBPO95073 299 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 PAPSS2O95340 614 aaPredicted RBP5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 LYPLA2O95372 231 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 RETP07949 1114 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 TYRP1P17643 537 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 ARF4P18085 180 aaPredicted RBP5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 RPL17P18621 184 aaKnown RBP5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 CD72P21854 359 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 FCARP24071 287 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 PIK3CBP42338 1070 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 TRAPPC10P48553 1259 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 PRIM2P49643 509 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 CDR1P51861 262 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 CASP5P51878 434 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 SHC2P98077 582 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 MBTD1Q05BQ5 628 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 GRIK3Q13003 919 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 MTAPQ13126 283 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 KRT32Q14532 448 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 MXD4Q14582 209 aaPredicted RBP5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 EMC2Q15006 297 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 EIF4HQ15056 248 aaKnown RBP5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 NAB2Q15742 525 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 WDR72Q3MJ13 1102 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 LIN9Q5TKA1 542 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 LAIR1Q6GTX8 287 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 TSSK4Q6SA08 328 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 PRSS55Q6UWB4 352 aaPredicted RBP5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 ZNF852Q6ZMS4 543 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 SPOCD1Q6ZMY3 1216 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 C1QL4Q86Z23 238 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 OR2C3Q8N628 320 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 KYQ8NBH2 561 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 RNF149Q8NC42 400 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 C3orf20Q8ND61 904 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 TCP11Q8WWU5 503 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 DNASE1L2Q92874 299 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 ZC3H10Q96K80 434 aaKnown RBP5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 CEP170P1Q96L14 293 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 CCDC138Q96M89 665 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 FAM20AQ96MK3 541 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 NT5C1BQ96P26 610 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 PAAF1Q9BRP4 392 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 TTPALQ9BTX7 342 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 SELENOOQ9BVL4 669 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 NXF3Q9H4D5 531 aaKnown RBP5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 MANSC1Q9H8J5 431 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 GDE1Q9NZC3 331 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 VPS54Q9P1Q0 977 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 CALCOCO1Q9P1Z2 691 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 DNMT3BQ9UBC3 853 aaKnown RBP5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 MBD1Q9UIS9 605 aaPredicted RBP5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 MAGEL2Q9UJ55 1249 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 MRPS17Q9Y2R5 130 aaKnown RBP5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 VWA7Q9Y334 891 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 HES2Q9Y543 173 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 LOC400499M0QZD8 3231 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 MTCL1Q9Y4B5 1905 aaKnown RBP5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 BPTFQ12830 3046 aa5.05□□□□□ -1.6
CDC42EP3-202ENST00000422687 DOCK6Q96HP0 2047 aa5.04□□□□□ -1.6
CDC42EP3-202ENST00000422687 NOTCH4Q99466 2003 aa5.04□□□□□ -1.6
CDC42EP3-202ENST00000422687 MYOCOSA0A1B0GUC4 107 aa5.04□□□□□ -1.6
CDC42EP3-202ENST00000422687 ARHGEF37A1IGU5 675 aa5.04□□□□□ -1.6
CDC42EP3-202ENST00000422687 CFAP69A5D8W1 941 aa5.04□□□□□ -1.6
CDC42EP3-202ENST00000422687 LRRC14BA6NHZ5 514 aa5.04□□□□□ -1.6
CDC42EP3-202ENST00000422687 TMEM189-UBE2V1I3L0A0 370 aa5.04□□□□□ -1.6
CDC42EP3-202ENST00000422687 PTGESO14684 152 aa5.04□□□□□ -1.6
CDC42EP3-202ENST00000422687 TBX3O15119 743 aa5.04□□□□□ -1.6
CDC42EP3-202ENST00000422687 CCL16O15467 120 aa5.04□□□□□ -1.6
CDC42EP3-202ENST00000422687 SLC37A4O43826 429 aa5.04□□□□□ -1.6
CDC42EP3-202ENST00000422687 AKR1B10O60218 316 aa5.04□□□□□ -1.6
CDC42EP3-202ENST00000422687 FOXD2O60548 495 aaPredicted RBP5.04□□□□□ -1.6
CDC42EP3-202ENST00000422687 SEMA7AO75326 666 aa5.04□□□□□ -1.6
CDC42EP3-202ENST00000422687 TADA2AO75478 443 aa5.04□□□□□ -1.6
CDC42EP3-202ENST00000422687 ERLIN2O94905 339 aa5.04□□□□□ -1.6
CDC42EP3-202ENST00000422687 C1QTNF9P0C862 333 aa5.04□□□□□ -1.6
CDC42EP3-202ENST00000422687 TYRP14679 529 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms