RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 RNF219Q5W0B1 726 aaPredicted RBP21.18■□□□□ 0.98
PKNOX1-202ENST00000418336 LRSAM1Q6UWE0 723 aa21.18■□□□□ 0.98
PKNOX1-202ENST00000418336 SETD3Q86TU7 594 aaPredicted RBP21.18■□□□□ 0.98
PKNOX1-202ENST00000418336 SYT12Q8IV01 421 aa21.18■□□□□ 0.98
PKNOX1-202ENST00000418336 CCDC117Q8IWD4 279 aaPredicted RBP21.18■□□□□ 0.98
PKNOX1-202ENST00000418336 NETO1Q8TDF5 533 aa21.18■□□□□ 0.98
PKNOX1-202ENST00000418336 PIGKQ92643 395 aa21.18■□□□□ 0.98
PKNOX1-202ENST00000418336 NUP58Q9BVL2 599 aa21.18■□□□□ 0.98
PKNOX1-202ENST00000418336 TRIM7Q9C029 511 aa21.18■□□□□ 0.98
PKNOX1-202ENST00000418336 XPO4Q9C0E2 1151 aaKnown RBP21.18■□□□□ 0.98
PKNOX1-202ENST00000418336 ISCUQ9H1K1 167 aa21.18■□□□□ 0.98
PKNOX1-202ENST00000418336 SERGEFQ9UGK8 458 aa21.18■□□□□ 0.98
PKNOX1-202ENST00000418336 ATXN2Q99700 1313 aaKnown RBP21.18■□□□□ 0.98
PKNOX1-202ENST00000418336 PI4KAP42356 2102 aa21.17■□□□□ 0.98
PKNOX1-202ENST00000418336 EDDM13A0A1B0GTR0 161 aa21.17■□□□□ 0.98
PKNOX1-202ENST00000418336 TARSL2A2RTX5 802 aaKnown RBP21.17■□□□□ 0.98
PKNOX1-202ENST00000418336 TMCO5BA8MYB1 307 aa21.17■□□□□ 0.98
PKNOX1-202ENST00000418336 GOLGA6L19H0YKK7 550 aa21.17■□□□□ 0.98
PKNOX1-202ENST00000418336 SNAP91O60641 907 aa21.17■□□□□ 0.98
PKNOX1-202ENST00000418336 ZMPSTE24O75844 475 aa21.17■□□□□ 0.98
PKNOX1-202ENST00000418336 MT-CO1P00395 513 aa21.17■□□□□ 0.98
PKNOX1-202ENST00000418336 ACSL1P33121 698 aa21.17■□□□□ 0.98
PKNOX1-202ENST00000418336 ST8SIA6P61647 398 aa21.17■□□□□ 0.98
PKNOX1-202ENST00000418336 TPM4P67936 248 aa21.17■□□□□ 0.98
PKNOX1-202ENST00000418336 SULT2A1Q06520 285 aa21.17■□□□□ 0.98
PKNOX1-202ENST00000418336 KLHL30Q0D2K2 578 aa21.17■□□□□ 0.98
PKNOX1-202ENST00000418336 CYP4V2Q6ZWL3 525 aaPredicted RBP21.17■□□□□ 0.98
PKNOX1-202ENST00000418336 TFAP2DQ7Z6R9 452 aa21.17■□□□□ 0.98
PKNOX1-202ENST00000418336 C1orf216Q8TAB5 229 aa21.17■□□□□ 0.98
PKNOX1-202ENST00000418336 FAM131CQ96AQ9 280 aa21.17■□□□□ 0.98
PKNOX1-202ENST00000418336 OR12D3Q9UGF7 316 aa21.17■□□□□ 0.98
PKNOX1-202ENST00000418336 VPS51Q9UID3 782 aa21.17■□□□□ 0.98
PKNOX1-202ENST00000418336 HS3ST2Q9Y278 367 aa21.17■□□□□ 0.98
PKNOX1-202ENST00000418336 CDX4O14627 284 aaPredicted RBP21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 ZBTB24O43167 697 aaPredicted RBP21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 SRGAP2O75044 1071 aa21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 RHOCP08134 193 aa21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 PLEKP08567 350 aaPredicted RBP21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 GLDCP23378 1020 aa21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 HOXD12P35452 270 aa21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 IRX4P78413 519 aa21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 ZBED6P86452 979 aa21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 SEMA3BQ13214 749 aa21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 PUM1Q14671 1186 aaKnown RBP eCLIP21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 ZNF776Q68DI1 518 aaPredicted RBP21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 SLC23A3Q6PIS1 610 aa21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 LRRC31Q6UY01 552 aa21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 PYROXD2Q8N2H3 581 aa21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 SH2D3CQ8N5H7 860 aa21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 CADM4Q8NFZ8 388 aa21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 DNASE2BQ8WZ79 361 aa21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 HSPA12BQ96MM6 686 aa21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 CNPY3Q9BT09 278 aa21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 ZYG11BQ9C0D3 744 aa21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 PABPC3Q9H361 631 aaKnown RBP21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 CAPN10Q9HC96 672 aa21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 SLCO1B1Q9Y6L6 691 aa21.16■□□□□ 0.98
PKNOX1-202ENST00000418336 CACNA1EQ15878 2313 aa21.15■□□□□ 0.98
PKNOX1-202ENST00000418336 TMEM191CA6NGB0 347 aa21.15■□□□□ 0.98
PKNOX1-202ENST00000418336 ZNF821O75541 412 aaPredicted RBP21.15■□□□□ 0.98
PKNOX1-202ENST00000418336 LRIG2O94898 1065 aa21.15■□□□□ 0.98
PKNOX1-202ENST00000418336 CD160O95971 181 aa21.15■□□□□ 0.98
PKNOX1-202ENST00000418336 FTLP02792 175 aaPredicted RBP21.15■□□□□ 0.98
PKNOX1-202ENST00000418336 SRCP12931 536 aa21.15■□□□□ 0.98
PKNOX1-202ENST00000418336 OXTRP30559 389 aa21.15■□□□□ 0.98
PKNOX1-202ENST00000418336 METAP1P53582 386 aa21.15■□□□□ 0.98
PKNOX1-202ENST00000418336 PPP1R2P3Q6NXS1 205 aa21.15■□□□□ 0.98
PKNOX1-202ENST00000418336 STK40Q8N2I9 435 aa21.15■□□□□ 0.98
PKNOX1-202ENST00000418336 DCAF4L2Q8NA75 395 aa21.15■□□□□ 0.98
PKNOX1-202ENST00000418336 OR7D4Q8NG98 312 aa21.15■□□□□ 0.98
PKNOX1-202ENST00000418336 VOPP1Q96AW1 172 aa21.15■□□□□ 0.98
PKNOX1-202ENST00000418336 ORAI3Q9BRQ5 295 aa21.15■□□□□ 0.98
PKNOX1-202ENST00000418336 GPR174Q9BXC1 333 aa21.15■□□□□ 0.98
PKNOX1-202ENST00000418336 TMEM248Q9NWD8 314 aa21.15■□□□□ 0.98
PKNOX1-202ENST00000418336 VPS28Q9UK41 221 aa21.15■□□□□ 0.98
PKNOX1-202ENST00000418336 FZD10Q9ULW2 581 aa21.15■□□□□ 0.98
PKNOX1-202ENST00000418336 ILVBLA1L0T0 632 aa21.14■□□□□ 0.97
PKNOX1-202ENST00000418336 METTL12A8MUP2 240 aa21.14■□□□□ 0.97
PKNOX1-202ENST00000418336 K7ERQ8 282 aa21.14■□□□□ 0.97
PKNOX1-202ENST00000418336 RNF103O00237 685 aa21.14■□□□□ 0.97
PKNOX1-202ENST00000418336 RTN2O75298 545 aa21.14■□□□□ 0.97
PKNOX1-202ENST00000418336 HNRNPH3P31942 346 aaKnown RBP21.14■□□□□ 0.97
PKNOX1-202ENST00000418336 CST6Q15828 149 aa21.14■□□□□ 0.97
PKNOX1-202ENST00000418336 AASDHQ4L235 1098 aaPredicted RBP21.14■□□□□ 0.97
PKNOX1-202ENST00000418336 C6orf118Q5T5N4 469 aa21.14■□□□□ 0.97
PKNOX1-202ENST00000418336 ZNF783Q6ZMS7 281 aa21.14■□□□□ 0.97
PKNOX1-202ENST00000418336 AADATQ8N5Z0 425 aa21.14■□□□□ 0.97
PKNOX1-202ENST00000418336 PEBP4Q96S96 227 aa21.14■□□□□ 0.97
PKNOX1-202ENST00000418336 RTKNQ9BST9 563 aa21.14■□□□□ 0.97
PKNOX1-202ENST00000418336 ACE2Q9BYF1 805 aaPredicted RBP21.14■□□□□ 0.97
PKNOX1-202ENST00000418336 TSPY26PQ9H489 355 aa21.14■□□□□ 0.97
PKNOX1-202ENST00000418336 C6orf106Q9H6K1 298 aaPredicted RBP21.14■□□□□ 0.97
PKNOX1-202ENST00000418336 NOL6Q9H6R4 1146 aaKnown RBP21.14■□□□□ 0.97
PKNOX1-202ENST00000418336 FSCN3Q9NQT6 498 aa21.14■□□□□ 0.97
PKNOX1-202ENST00000418336 ARHGAP20Q9P2F6 1191 aa21.14■□□□□ 0.97
PKNOX1-202ENST00000418336 KHNYNO15037 678 aaKnown RBP21.13■□□□□ 0.97
PKNOX1-202ENST00000418336 MID1O15344 667 aa21.13■□□□□ 0.97
PKNOX1-202ENST00000418336 SMAD6O43541 496 aaKnown RBP21.13■□□□□ 0.97
PKNOX1-202ENST00000418336 ACADMP11310 421 aa21.13■□□□□ 0.97
PKNOX1-202ENST00000418336 RHOQP17081 205 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms