RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 C20orf96Q9NUD7 363 aaPredicted RBP8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 PRR12Q9ULL5 1215 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 CENPFP49454 3210 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 C1orf232A0A0U1RR37 186 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 TCRBV3S1A0A5B6 114 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 DLGAP1O14490 977 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 ALDH1A2O94788 518 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 KRT3P12035 628 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 ADORA2AP29274 412 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 CDH5P33151 784 aaPredicted RBP8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 TCF7P36402 384 aaPredicted RBP8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 NIPAL4Q0D2K0 466 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 PACRGLQ8N7B6 248 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 HPS1Q92902 700 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 TMA16Q96EY4 203 aaKnown RBP8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 OTUD5Q96G74 571 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 TUBA1CQ9BQE3 449 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 NTPCRQ9BSD7 190 aaKnown RBP8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 EHD1Q9H4M9 534 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 PARVBQ9HBI1 364 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 MRPL40Q9NQ50 206 aaKnown RBP8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 NXF1Q9UBU9 619 aaKnown RBP8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 PCSK1NQ9UHG2 260 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 PCDHGC3Q9UN70 934 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 TESPA1A2RU30 521 aaPredicted RBP8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 TCAF2A6NFQ2 919 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 HDAC3O15379 428 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 UFL1O94874 794 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 BCL10O95999 233 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 BMP2P12643 396 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 HNRNPFP52597 415 aaKnown RBP8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 TMBIM6P55061 237 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 MMRN1Q13201 1228 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 NME3Q13232 169 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 PPM1JQ5JR12 505 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 AGAP7PQ5VUJ5 663 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 CYP2U1Q7Z449 544 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 ZBTB46Q86UZ6 589 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 ADAM32Q8TC27 787 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 ERLEC1Q96DZ1 483 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 MXRA8Q9BRK3 442 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 EFHD1Q9BUP0 239 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 PCDHAC1Q9H158 963 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 SACM1LQ9NTJ5 587 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 ADA2Q9NZK5 511 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 SLC17A6Q9P2U8 582 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 CNOT6Q9ULM6 557 aaKnown RBP8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 NEMP1O14524 444 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 DHX15O43143 795 aaKnown RBP8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 PAPSS1O43252 624 aaPredicted RBP8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 EXTL3O43909 919 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 RSL1D1O76021 490 aaKnown RBP8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 MAP4P27816 1152 aaKnown RBP8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 RCVRNP35243 200 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 PRKCQQ04759 706 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 IRAK1BP1Q5VVH5 260 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 STEAP4Q687X5 459 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 GPAT2Q6NUI2 795 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 UNC5BQ8IZJ1 945 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 MINDY2Q8NBR6 621 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 AGR3Q8TD06 166 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 STON2Q8WXE9 905 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 ZNF347Q96SE7 839 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 ADI1Q9BV57 179 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 NANOGQ9H9S0 305 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 PKD2L1Q9P0L9 805 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 ZBTB21Q9ULJ3 1066 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 ENDOD1O94919 500 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 ALOX5P09917 674 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 ITGB5P18084 799 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 MIPP30301 263 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 TRAP1Q12931 704 aaKnown RBP8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 SPP2Q13103 211 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 TFDP2Q14188 446 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 SF3B4Q15427 424 aaKnown RBP eCLIP8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 SMUG1Q53HV7 270 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 KCTD8Q6ZWB6 473 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 IFNLR1Q8IU57 520 aaPredicted RBP8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 BSNDQ8WZ55 320 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 AKT1S1Q96B36 256 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 NPAS2Q99743 824 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 ILKAPQ9H0C8 392 aaPredicted RBP8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 SIAEQ9HAT2 523 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 PCDHGA7Q9Y5G6 932 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 RBL1P28749 1068 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 IDUAP35475 653 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 MLLT10P55197 1068 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 PPIL2Q13356 520 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 ZNF618Q5T7W0 954 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 INTS11Q5TA45 600 aaKnown RBP8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 SEL1L3Q68CR1 1132 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 TNS4Q8IZW8 715 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 SAMD3Q8N6K7 520 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 OR13F1Q8NGS4 319 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 PPWD1Q96BP3 646 aaKnown RBP8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 FEM1CQ96JP0 617 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 TCF12Q99081 682 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 KLHL25Q9H0H3 589 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 KCNH7Q9NS40 1196 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 ZNF358Q9NW07 568 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms