RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 SPATA31A3Q5VYP0 1347 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 WDR17Q8IZU2 1322 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 C1orf167Q5SNV9 1468 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 C3orf70A6NLC5 250 aaPredicted RBP10.46□□□□□ -0.73
SATB1-204ENST00000417717 UBAP1LF5GYI3 381 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 SUPT7LO94864 414 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 GNA15P30679 374 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 GNA12Q03113 381 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 ZNF574Q6ZN55 896 aaPredicted RBP10.46□□□□□ -0.73
SATB1-204ENST00000417717 TIGD4Q8IY51 512 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 TCTEX1D2Q8WW35 142 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 ZNF496Q96IT1 587 aaPredicted RBP10.46□□□□□ -0.73
SATB1-204ENST00000417717 Q96MT0 163 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 PUS3Q9BZE2 481 aaKnown RBP10.46□□□□□ -0.73
SATB1-204ENST00000417717 ZC3H12CQ9C0D7 883 aaKnown RBP10.46□□□□□ -0.73
SATB1-204ENST00000417717 ITGA11Q9UKX5 1188 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 FNDC3AQ9Y2H6 1198 aaKnown RBP10.46□□□□□ -0.73
SATB1-204ENST00000417717 RPS6KL1Q9Y6S9 549 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 ADGRA2Q96PE1 1338 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 SORBS3O60504 671 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 CLPXO76031 633 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 CD2P06729 351 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 SERPINF2P08697 491 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 RGS6P49758 472 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 CLK3P49761 638 aaKnown RBP10.46□□□□□ -0.74
SATB1-204ENST00000417717 CDH4P55283 916 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 RPS7P62081 194 aaKnown RBP10.46□□□□□ -0.74
SATB1-204ENST00000417717 CSNK2BP67870 215 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 BNIP3Q12983 259 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 ZIK1Q3SY52 487 aaPredicted RBP10.46□□□□□ -0.74
SATB1-204ENST00000417717 KLHL24Q6TFL4 600 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 DEF8Q6ZN54 512 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 ARCQ7LC44 396 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 SLC22A16Q86VW1 577 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 DGKHQ86XP1 1220 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 NFATC2IPQ8NCF5 419 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 ZNF420Q8TAQ5 688 aaPredicted RBP10.46□□□□□ -0.74
SATB1-204ENST00000417717 DIRAS2Q96HU8 199 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 PPP1R2P1Q96PQ5 205 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 PHOX2BQ99453 314 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 COPS4Q9BT78 406 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 RIOK2Q9BVS4 552 aaKnown RBP10.46□□□□□ -0.74
SATB1-204ENST00000417717 TMEM117Q9H0C3 514 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 TMEM168Q9H0V1 697 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 CYP4F12Q9HCS2 524 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 MORF4L1Q9UBU8 362 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.46□□□□□ -0.74
SATB1-204ENST00000417717 KMOO15229 486 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 PEX11AO75192 247 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 PHKG2P15735 406 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 NELFEP18615 380 aaKnown RBP10.46□□□□□ -0.74
SATB1-204ENST00000417717 MATN1P21941 496 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 SLC16A1P53985 500 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 CDC42P60953 191 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 CAMK1Q14012 370 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 SYTL3Q4VX76 610 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 C6orf52Q5T4I8 152 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 ECHDC2Q86YB7 292 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 SLC30A5Q8TAD4 765 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 SPATA18Q8TC71 538 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 ZFP42Q96MM3 310 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 MKRN2Q9H000 416 aaKnown RBP10.46□□□□□ -0.74
SATB1-204ENST00000417717 LATS2Q9NRM7 1088 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 SH3BP4Q9P0V3 963 aa10.46□□□□□ -0.74
SATB1-204ENST00000417717 E2F8A0AVK6 867 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 J3QRK9 145 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 ZNF14P17017 642 aaPredicted RBP10.45□□□□□ -0.74
SATB1-204ENST00000417717 ETV1P50549 477 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 AP3S2P59780 193 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 FAM91A1Q658Y4 838 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 FBXO42Q6P3S6 717 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 ARMCX2Q7L311 632 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 TICAM1Q8IUC6 712 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 GATAD2BQ8WXI9 593 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 FBXL8Q96CD0 374 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 CRELD1Q96HD1 420 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 AP1S3Q96PC3 154 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 CGREF1Q99674 301 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 MMTAG2Q9BU76 263 aaKnown RBP10.45□□□□□ -0.74
SATB1-204ENST00000417717 PTBP2Q9UKA9 531 aaKnown RBP10.45□□□□□ -0.74
SATB1-204ENST00000417717 TBC1D24Q9ULP9 559 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 KIF13AQ9H1H9 1805 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 C9IYK1 514 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 TEX46H3BTG2 121 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 DYRK3O43781 588 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 REM1O75628 298 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 PEPDP12955 493 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 PEX2P28328 305 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 MAGEA12P43365 314 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 SLC15A1P46059 708 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 RPL21P46778 160 aaKnown RBP10.45□□□□□ -0.74
SATB1-204ENST00000417717 EIF6P56537 245 aaKnown RBP10.45□□□□□ -0.74
SATB1-204ENST00000417717 NFIAQ12857 509 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 NFX1Q12986 1120 aaKnown RBP10.45□□□□□ -0.74
SATB1-204ENST00000417717 HKDC1Q2TB90 917 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 KLHL35Q6PF15 583 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 ZNF662Q6ZS27 426 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 USP43Q70EL4 1123 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 OTOAQ7RTW8 1153 aa10.45□□□□□ -0.74
SATB1-204ENST00000417717 FAM160B2Q86V87 743 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms