RNA–Protein interactions for RNA: ENST00000416918.5

TRAPPC12-205, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-205ENST00000416918 SOD2P04179 222 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 OR4Q2P0C623 313 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 DHRS4L1P0CG22 281 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 TROVE2P10155 538 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 PAMP19021 973 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 TAC1P20366 129 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 RPA3P35244 121 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 SPRP35270 261 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 ATP5C1P36542 298 aaKnown RBP11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 ETFBP38117 255 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 GP5P40197 560 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 MAGEA9P43362 315 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 HARS2P49590 506 aaKnown RBP11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 NRLP54845 237 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 CSE1LP55060 971 aaKnown RBP11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 WDR4P57081 412 aaKnown RBP11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 TLE2Q04725 743 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 CDK18Q07002 472 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 CCDC15Q0P6D6 951 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 TAF10Q12962 218 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 IFT88Q13099 833 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 PLD1Q13393 1074 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 CRYMQ14894 314 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 VEPH1Q14D04 833 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 PSMD5Q16401 504 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 PABPC1LQ4VXU2 614 aaKnown RBP11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 PCID2Q5JVF3 399 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 C10orf120Q5SQS8 335 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 ATG16L1Q676U5 607 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 RNF43Q68DV7 783 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 PDPK2PQ6A1A2 396 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 SH2D5Q6ZV89 423 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 CCDC91Q7Z6B0 441 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 ARHGAP12Q8IWW6 846 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 NPWQ8N729 165 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 ZNF461Q8TAF7 563 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 ZSCAN18Q8TBC5 510 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 MGARPQ8TDB4 240 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 SREK1Q8WXA9 508 aaKnown RBP11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 PLD4Q96BZ4 506 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 IGSF21Q96ID5 467 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 ELAC2Q9BQ52 826 aaKnown RBP11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 KIFC1Q9BW19 673 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 ZMYND15Q9H091 742 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 SLC25A51Q9H1U9 297 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 ARNT2Q9HBZ2 717 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 PRDM5Q9NQX1 630 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 TMPRSS4Q9NRS4 437 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 TMEM39AQ9NV64 488 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 ZFATQ9P243 1243 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 SFMBT1Q9UHJ3 866 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 IPO11Q9UI26 975 aaKnown RBP11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 SOX13Q9UN79 622 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 MFHAS1Q9Y4C4 1052 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 HS3ST4Q9Y661 456 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 PATJQ8NI35 1801 aa11.28□□□□□ -0.6
TRAPPC12-205ENST00000416918 A0A1W2PPM1 405 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 WDR27A2RRH5 827 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 F8W810 466 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 DFFAO00273 331 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 ABLIM3O94929 683 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 FSBPO95073 299 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 EPOP01588 193 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 CREB1P16220 341 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 PFKLP17858 780 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 MGAT1P26572 445 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 ALDH1A3P47895 512 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 NEK3P51956 506 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 SESN2P58004 480 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 DSG1Q02413 1049 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 IL10RBQ08334 325 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 NIPAL4Q0D2K0 466 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 SETDB1Q15047 1291 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 RABGAP1LQ5R372 815 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 HECTD3Q5T447 861 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 FOXR1Q6PIV2 292 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 LVRNQ6Q4G3 990 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 RTL10Q7L3V2 364 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 LMNTD2Q8IXW0 634 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 ZNF683Q8IZ20 524 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 C4orf33Q8N1A6 199 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 ARNTL2Q8WYA1 636 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 PEX13Q92968 403 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 TOP1MTQ969P6 601 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 CERS2Q96G23 380 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 TMEM169Q96HH4 297 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 AGAP3Q96P47 875 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 SEPT5Q99719 369 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 SIKE1Q9BRV8 207 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 TUBB6Q9BUF5 446 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 HERC2P3Q9BVR0 1158 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 FAM96AQ9H5X1 160 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 SPG21Q9NZD8 308 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 TRPM5Q9NZQ8 1165 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 MID2Q9UJV3 735 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 NEU3Q9UQ49 428 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 PLLPQ9Y342 182 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 ASB3Q9Y575 518 aa11.27□□□□□ -0.61
TRAPPC12-205ENST00000416918 RPS6KL1Q9Y6S9 549 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms