RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 ZNF670Q9BS34 389 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 TASP1Q9H6P5 420 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 C20orf96Q9NUD7 363 aaPredicted RBP14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 GJD2Q9UKL4 321 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 NEMP2A6NFY4 417 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 ARF4P18085 180 aaPredicted RBP14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 IGFBP6P24592 240 aaPredicted RBP14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 ABCD1P33897 745 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 GRIA4P48058 902 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 NUMBP49757 651 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 B3GNT6Q6ZMB0 384 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 BNC2Q6ZN30 1099 aaPredicted RBP14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 KBTBD7Q8WVZ9 684 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 SLC45A3Q96JT2 553 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 GPR20Q99678 358 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 RTKNQ9BST9 563 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 ANLNQ9NQW6 1124 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 TUBGCP4Q9UGJ1 667 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 SORCS3Q9UPU3 1222 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 SCN1AP35498 2009 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 PGAM1P18669 254 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 MX2P20592 715 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 GLDCP23378 1020 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 STT3AP46977 705 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 NDUFV1P49821 464 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 STEAP4Q687X5 459 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 DUS1LQ6P1R4 473 aaKnown RBP14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 KYQ8NBH2 561 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 KCTD4Q8WVF5 259 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 LRTOMTQ8WZ04 291 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 SPATA33Q96N06 139 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 ZMAT2Q96NC0 199 aaKnown RBP14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 SLC39A3Q9BRY0 314 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 PDZD7Q9H5P4 517 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 WDR41Q9HAD4 459 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 STK39Q9UEW8 545 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 SFMBT1Q9UHJ3 866 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 AKT3Q9Y243 479 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 KCNU1A8MYU2 1149 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 GRID2O43424 1007 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 GRK2P25098 689 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 HPCAP84074 193 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 MXD4Q14582 209 aaPredicted RBP14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 MAP3K21Q5TCX8 1036 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 LRRC8BQ6P9F7 803 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 MARVELD2Q8N4S9 558 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 RBM38Q9H0Z9 239 aaKnown RBP14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 CAAP1Q9H8G2 361 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 NMRAL1Q9HBL8 299 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 RNF11Q9Y3C5 154 aa14.88□□□□□ -0.03
SEMA3F-202ENST00000413852 A0A0J9YVX5 310 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 C9JVG2 144 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 CLDN5O00501 218 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 SBK3P0C264 359 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 HNRNPLP14866 589 aaKnown RBP eCLIP14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 TSPAN8P19075 237 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 GP5P40197 560 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 CYLC2Q14093 348 aaPredicted RBP14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 URGCPQ8TCY9 931 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 USP33Q8TEY7 942 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 SLC35F5Q8WV83 523 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 APBA2Q99767 749 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 SLC29A1Q99808 456 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 COQ10BQ9H8M1 238 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 CACNG4Q9UBN1 327 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 EN1Q05925 392 aaPredicted RBP14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 GRM3Q14832 879 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 DCAF6Q58WW2 860 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 PIGGQ5H8A4 983 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 FERMT1Q9BQL6 677 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 TRIM8Q9BZR9 551 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 ADAMTS5Q9UNA0 930 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 ANK1P16157 1881 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 SMIM31A0A1B0GVY4 71 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 TFPTP0C1Z6 253 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 ALOX15P16050 662 aaPredicted RBP14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 UGT1A6P19224 532 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 TFEBP19484 476 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 ICAM3P32942 547 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 PRAMEP78395 509 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 CDK18Q07002 472 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 ART3Q13508 389 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 DPYSL2Q16555 572 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 FSCBQ5H9T9 825 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 AGBL3Q8NEM8 1001 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 DIS3LQ8TF46 1054 aaKnown RBP14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 RPL10LQ96L21 214 aaKnown RBP14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 FRMD8Q9BZ67 464 aaPredicted RBP14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 TNFRSF12AQ9NP84 129 aa14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 KLHL8Q9P2G9 620 aaPredicted RBP14.87□□□□□ -0.03
SEMA3F-202ENST00000413852 TRIM13O60858 407 aa14.86□□□□□ -0.03
SEMA3F-202ENST00000413852 POLBP06746 335 aa14.86□□□□□ -0.03
SEMA3F-202ENST00000413852 CKMT2P17540 419 aa14.86□□□□□ -0.03
SEMA3F-202ENST00000413852 NMBRP28336 390 aa14.86□□□□□ -0.03
SEMA3F-202ENST00000413852 NME5P56597 212 aa14.86□□□□□ -0.03
SEMA3F-202ENST00000413852 IFRD2Q12894 506 aaPredicted RBP14.86□□□□□ -0.03
SEMA3F-202ENST00000413852 RARS2Q5T160 578 aaKnown RBP14.86□□□□□ -0.03
SEMA3F-202ENST00000413852 SLC41A1Q8IVJ1 513 aa14.86□□□□□ -0.03
SEMA3F-202ENST00000413852 DEFB106AQ8N104 65 aa14.86□□□□□ -0.03
SEMA3F-202ENST00000413852 RNF169Q8NCN4 708 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms