RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 KIF5BP33176 963 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 GRK5P34947 590 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 HTR7P34969 479 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 BSGP35613 385 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 THPOP40225 353 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 ZNF41P51814 821 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-204ENST00000412061 RNASELQ05823 741 aaKnown RBP4.81□□□□□ -1.64
BRCA1-204ENST00000412061 FOXE3Q13461 319 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 FHL3Q13643 280 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 ACOX1Q15067 660 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 PTPRRQ15256 657 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 TBRG1Q3YBR2 411 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 TREML2Q5T2D2 321 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 MSANTD2Q6P1R3 559 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 DENND1BQ6P3S1 775 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 MTFR2Q6P444 385 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 CATSPER4Q7RTX7 472 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 ADGRG6Q86SQ4 1221 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 UNC45BQ8IWX7 931 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 CCDC105Q8IYK2 499 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 THNSL1Q8IYQ7 743 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 TMCO5AQ8N6Q1 288 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 TEX9Q8N6V9 391 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 SUPT20HQ8NEM7 779 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 GDAP1Q8TB36 358 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 PIGOQ8TEQ8 1089 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 ZNF653Q96CK0 615 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 R3HDM4Q96D70 268 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 ELP4Q96EB1 424 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 ZNF503Q96F45 646 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 Q96MF0 132 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 PIP5K1AQ99755 562 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 AIFM2Q9BRQ8 373 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 HGH1Q9BTY7 390 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 WDR11Q9BZH6 1224 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 SERHL2Q9H4I8 314 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 MROH8Q9H579 483 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 SLC35C2Q9NQQ7 365 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 KCND2Q9NZV8 630 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 C5AR2Q9P296 337 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 LIMA1Q9UHB6 759 aaKnown RBP4.81□□□□□ -1.64
BRCA1-204ENST00000412061 SUFUQ9UMX1 484 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 RCE1Q9Y256 329 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 PCDHA10Q9Y5I2 948 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 KCNE2Q9Y6J6 123 aa4.81□□□□□ -1.64
BRCA1-204ENST00000412061 LIPT2A6NK58 231 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 SH2D7A6NKC9 451 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-204ENST00000412061 TMEM232C9JQI7 657 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 SYN3O14994 580 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 MPPED1O15442 326 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 HNRNPCL1O60812 293 aaKnown RBP4.8□□□□□ -1.64
BRCA1-204ENST00000412061 B3GALNT1O75752 331 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 WDR47O94967 919 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 HEXIM1O94992 359 aaKnown RBP4.8□□□□□ -1.64
BRCA1-204ENST00000412061 METTL18O95568 372 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 FESP07332 822 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 CHRM2P08172 466 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 FOLR3P41439 243 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 GPD2P43304 727 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 EIF4A1P60842 406 aaKnown RBP4.8□□□□□ -1.64
BRCA1-204ENST00000412061 DGCR2P98153 550 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 TNFAIP1Q13829 316 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 BMPR2Q13873 1038 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 IRF3Q14653 427 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 PTPAQ15257 358 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 ADIPOQQ15848 244 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 ST3GAL2Q16842 350 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 TCP11X2Q5H9J9 407 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 MIIPQ5JXC2 388 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 CCDC158Q5M9N0 1113 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 TTI2Q6NXR4 508 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 TATDN1Q6P1N9 297 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 MRGPREQ86SM8 312 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 LRRC71Q8N4P6 559 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 METTL25Q8N6Q8 603 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 ZBTB8BQ8NAP8 495 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-204ENST00000412061 POMGNT2Q8NAT1 580 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 GPR150Q8NGU9 434 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 SH3RF3Q8TEJ3 882 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-204ENST00000412061 XAGE5Q8WWM1 108 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 SAAL1Q96ER3 474 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 REXO5Q96IC2 774 aaKnown RBP4.8□□□□□ -1.64
BRCA1-204ENST00000412061 PBKQ96KB5 322 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 CMTM3Q96MX0 182 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 DPCDQ9BVM2 203 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-204ENST00000412061 KLHL4Q9C0H6 718 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 CXorf56Q9H5V9 222 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 KAT14Q9H8E8 782 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 TLR8Q9NR97 1041 aaKnown RBP4.8□□□□□ -1.64
BRCA1-204ENST00000412061 PDRG1Q9NUG6 133 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 BEX4Q9NWD9 120 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-204ENST00000412061 ALKBH4Q9NXW9 302 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 EHD2Q9NZN4 543 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 ZNF70Q9UC06 446 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-204ENST00000412061 PCDHB7Q9Y5E2 793 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 ENTPD2Q9Y5L3 495 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 KAT6AQ92794 2004 aa4.8□□□□□ -1.64
BRCA1-204ENST00000412061 FAM237BA0A1B0GVD1 139 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 WDR27A2RRH5 827 aa4.79□□□□□ -1.64
BRCA1-204ENST00000412061 AGAP5A6NIR3 686 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms