RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 RPL7AP62424 266 aaKnown RBP19.58■□□□□ 0.72
SF3A1-202ENST00000411423 FOXK2Q01167 660 aa19.58■□□□□ 0.72
SF3A1-202ENST00000411423 CST6Q15828 149 aa19.58■□□□□ 0.72
SF3A1-202ENST00000411423 MANEALQ5VSG8 457 aa19.58■□□□□ 0.72
SF3A1-202ENST00000411423 AADATQ8N5Z0 425 aa19.58■□□□□ 0.72
SF3A1-202ENST00000411423 C3orf20Q8ND61 904 aa19.58■□□□□ 0.72
SF3A1-202ENST00000411423 FAM172AQ8WUF8 416 aa19.58■□□□□ 0.72
SF3A1-202ENST00000411423 FOXJ1Q92949 421 aa19.58■□□□□ 0.72
SF3A1-202ENST00000411423 TMEM9BQ9NQ34 198 aa19.58■□□□□ 0.72
SF3A1-202ENST00000411423 NDFIP2Q9NV92 336 aa19.58■□□□□ 0.72
SF3A1-202ENST00000411423 PI4KAP42356 2102 aa19.58■□□□□ 0.72
SF3A1-202ENST00000411423 DOCK4Q8N1I0 1966 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 A0A1W2PP55 124 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 MEI4A8MW99 385 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 K7ERQ8 282 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 RNF103O00237 685 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 GIPC1O14908 333 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 CCP110O43303 1012 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 ATP9BO43861 1147 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 CALB1P05937 261 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 RHOCP08134 193 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 RRM1P23921 792 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 ADRA1BP35368 520 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 PBX1P40424 430 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 BNC1Q01954 994 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 OGDHQ02218 1023 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 ZBTB16Q05516 673 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 C1QBPQ07021 282 aaKnown RBP19.57■□□□□ 0.72
SF3A1-202ENST00000411423 ZSCAN23Q3MJ62 389 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 ACAD10Q6JQN1 1059 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 ZNF571Q7Z3V5 609 aaPredicted RBP19.57■□□□□ 0.72
SF3A1-202ENST00000411423 MCOLN2Q8IZK6 566 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 ZCCHC9Q8N567 271 aaKnown RBP19.57■□□□□ 0.72
SF3A1-202ENST00000411423 OR7D4Q8NG98 312 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 CEP76Q8TAP6 659 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 ORAI3Q9BRQ5 295 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 SELENOOQ9BVL4 669 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 EIF2B4Q9UI10 523 aaKnown RBP19.57■□□□□ 0.72
SF3A1-202ENST00000411423 VPS51Q9UID3 782 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 VPS28Q9UK41 221 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 MYO6Q9UM54 1294 aa19.57■□□□□ 0.72
SF3A1-202ENST00000411423 SIGLEC16A6NMB1 481 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 C10orf142B7Z368 130 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 PLK4O00444 970 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 ATMINO43313 823 aaPredicted RBP19.56■□□□□ 0.72
SF3A1-202ENST00000411423 SEMA4FO95754 770 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 SRCP12931 536 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 GPD1P21695 349 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 DPP6P42658 865 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 PSMD8P48556 350 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 VASPP50552 380 aaPredicted RBP19.56■□□□□ 0.72
SF3A1-202ENST00000411423 OXCT1P55809 520 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 FANCCQ00597 558 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 SULT2A1Q06520 285 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 UAP1L1Q3KQV9 507 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 FILIP1LQ4L180 1135 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 WDR45BQ5MNZ6 344 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 SYCP2LQ5T4T6 812 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 STRADAQ7RTN6 431 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 SH2D3CQ8N5H7 860 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 GTPBP2Q9BX10 602 aaKnown RBP19.56■□□□□ 0.72
SF3A1-202ENST00000411423 BTBD1Q9H0C5 482 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 MUC3BQ9H195 1237 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 MIR1-1HGQ9H1L0 117 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 NEUROG2Q9H2A3 272 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 HAUS4Q9H6D7 363 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 FBXL12Q9NXK8 326 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 AIPL1Q9NZN9 384 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 SARDHQ9UL12 918 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 PAXBP1Q9Y5B6 917 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 ACTL7AQ9Y615 435 aa19.56■□□□□ 0.72
SF3A1-202ENST00000411423 TMCO5BA8MYB1 307 aa19.55■□□□□ 0.72
SF3A1-202ENST00000411423 SERPINC1P01008 464 aa19.55■□□□□ 0.72
SF3A1-202ENST00000411423 IGHV4-34P06331 123 aa19.55■□□□□ 0.72
SF3A1-202ENST00000411423 SKILP12757 684 aa19.55■□□□□ 0.72
SF3A1-202ENST00000411423 TNFAIP3P21580 790 aa19.55■□□□□ 0.72
SF3A1-202ENST00000411423 KCNA4P22459 653 aa19.55■□□□□ 0.72
SF3A1-202ENST00000411423 SLC8A1P32418 973 aa19.55■□□□□ 0.72
SF3A1-202ENST00000411423 DRD3P35462 400 aa19.55■□□□□ 0.72
SF3A1-202ENST00000411423 DLG2Q15700 870 aa19.55■□□□□ 0.72
SF3A1-202ENST00000411423 ASIC2Q16515 512 aa19.55■□□□□ 0.72
SF3A1-202ENST00000411423 DNAJC24Q6P3W2 148 aa19.55■□□□□ 0.72
SF3A1-202ENST00000411423 LRRC31Q6UY01 552 aa19.55■□□□□ 0.72
SF3A1-202ENST00000411423 LINGO4Q6UY18 593 aa19.55■□□□□ 0.72
SF3A1-202ENST00000411423 Q6ZVU0 165 aa19.55■□□□□ 0.72
SF3A1-202ENST00000411423 SETD3Q86TU7 594 aaPredicted RBP19.55■□□□□ 0.72
SF3A1-202ENST00000411423 NLRP14Q86W24 1093 aa19.55■□□□□ 0.72
SF3A1-202ENST00000411423 PYROXD2Q8N2H3 581 aa19.55■□□□□ 0.72
SF3A1-202ENST00000411423 BIRC7Q96CA5 298 aa19.55■□□□□ 0.72
SF3A1-202ENST00000411423 MCEEQ96PE7 176 aa19.55■□□□□ 0.72
SF3A1-202ENST00000411423 PPARGC1AQ9UBK2 798 aaKnown RBP19.55■□□□□ 0.72
SF3A1-202ENST00000411423 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.55■□□□□ 0.72
SF3A1-202ENST00000411423 DDX3XO00571 662 aaKnown RBP eCLIP19.54■□□□□ 0.724e-8■■■■□ 21.7
SF3A1-202ENST00000411423 ARHGAP33O14559 1287 aa19.54■□□□□ 0.72
SF3A1-202ENST00000411423 SMAD6O43541 496 aaKnown RBP19.54■□□□□ 0.72
SF3A1-202ENST00000411423 ZMPSTE24O75844 475 aa19.54■□□□□ 0.72
SF3A1-202ENST00000411423 KCNK5O95279 499 aa19.54■□□□□ 0.72
SF3A1-202ENST00000411423 OR1E1P30953 314 aa19.54■□□□□ 0.72
SF3A1-202ENST00000411423 PRKCIP41743 596 aa19.54■□□□□ 0.72
SF3A1-202ENST00000411423 GALCP54803 685 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms