RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 MPPE1Q53F39 396 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 FUT10Q6P4F1 479 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 NKAPQ8N5F7 415 aaKnown RBP17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 NAALADL1Q9UQQ1 740 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 HBS1LQ9Y450 684 aaKnown RBP17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 OVGP1Q12889 678 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 C15orf59Q2T9L4 293 aaPredicted RBP17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 PTAR1Q7Z6K3 402 aaPredicted RBP17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 COMMD8Q9NX08 183 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 HAO1Q9UJM8 370 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 FAM95CA0A1B0GW59 222 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 PRR23AA6NEV1 266 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 TMEM114B3SHH9 223 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 KATNA1O75449 491 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 CATP04040 527 aaKnown RBP17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 CCNB1P14635 433 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 HLA-DPA1P20036 260 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 PTPN9P43378 593 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 FBXW4P57775 412 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 NPY5RQ15761 445 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 C1orf127Q8N9H9 656 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 LEMD2Q8NC56 503 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 STARD8Q92502 1023 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 ABTB1Q969K4 478 aaPredicted RBP17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 HES6Q96HZ4 224 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 NLNQ9BYT8 704 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 GPR88Q9GZN0 384 aa17.09■□□□□ 0.33
PCDHA13-202ENST00000409494 ABHD14A-ACY1A0A1B0GW23 586 aa17.08■□□□□ 0.33
PCDHA13-202ENST00000409494 MTA2O94776 668 aa17.08■□□□□ 0.33
PCDHA13-202ENST00000409494 APLP1P51693 650 aa17.08■□□□□ 0.33
PCDHA13-202ENST00000409494 SETMARQ53H47 684 aaPredicted RBP17.08■□□□□ 0.33
PCDHA13-202ENST00000409494 ANKS6Q68DC2 871 aa17.08■□□□□ 0.33
PCDHA13-202ENST00000409494 ARHGAP17Q68EM7 881 aa17.08■□□□□ 0.33
PCDHA13-202ENST00000409494 NEPROQ6NW34 567 aa17.08■□□□□ 0.33
PCDHA13-202ENST00000409494 POTEHQ6S545 545 aa17.08■□□□□ 0.33
PCDHA13-202ENST00000409494 KYAT3Q6YP21 454 aaKnown RBP17.08■□□□□ 0.33
PCDHA13-202ENST00000409494 ATL1Q8WXF7 558 aa17.08■□□□□ 0.33
PCDHA13-202ENST00000409494 MCCC1Q96RQ3 725 aaPredicted RBP17.08■□□□□ 0.33
PCDHA13-202ENST00000409494 MRPL45Q9BRJ2 306 aaKnown RBP17.08■□□□□ 0.33
PCDHA13-202ENST00000409494 RXFP1Q9HBX9 757 aa17.08■□□□□ 0.33
PCDHA13-202ENST00000409494 HEY2Q9UBP5 337 aa17.08■□□□□ 0.33
PCDHA13-202ENST00000409494 ADGRA2Q96PE1 1338 aa17.08■□□□□ 0.33
PCDHA13-202ENST00000409494 SRRM3A6NNA2 597 aaPredicted RBP17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 LIASO43766 372 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 FSBPO95073 299 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 FGFR1P11362 822 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 DGKAP23743 735 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 IFI35P80217 286 aaPredicted RBP17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 ACOX1Q15067 660 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 TPGS2Q68CL5 300 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 SLC9A7Q96T83 725 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 EFCAB1Q9HAE3 211 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 ERCC2P18074 760 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 KCNA3P22001 575 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 MGAT1P26572 445 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 ADRA1BP35368 520 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 VHLP40337 213 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 ATAT1Q5SQI0 421 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 TMEM154Q6P9G4 183 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 ATXN2LQ8WWM7 1075 aaKnown RBP17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 CASP10Q92851 521 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 NAF1Q96HR8 494 aaKnown RBP17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 C11orf84Q9BUA3 381 aaPredicted RBP17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 ELOVL6Q9H5J4 265 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 FGF1P05230 155 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 ATXN8OSP0DMR3 200 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 ENO3P13929 434 aaPredicted RBP17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 CSE1LP55060 971 aaKnown RBP17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 PTP4A2Q12974 167 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 ZNF792Q3KQV3 632 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 PARP15Q460N3 678 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 CEP70Q8NHQ1 597 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 ACTR8Q9H981 624 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 TEKT2Q9UIF3 430 aa17.08■□□□□ 0.32
PCDHA13-202ENST00000409494 hCG_1818297A0A087WSY0 165 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 TRIM13O60858 407 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 ABHD2P08910 425 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 ADRA1DP25100 572 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 TTPAP49638 278 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 CXorf40AQ8TE69 158 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 SGF29Q96ES7 293 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 YIPF2Q9BWQ6 316 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 SQORQ9Y6N5 450 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 NFATC1O95644 943 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 SCNN1AP37088 669 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 DAB2IPQ5VWQ8 1189 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 PRPF39Q86UA1 669 aaKnown RBP17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 LCA5Q86VQ0 697 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 ALLCQ8N6M5 410 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 TIFAQ96CG3 184 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 KREMEN1Q96MU8 473 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 TMEM175Q9BSA9 504 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 HSD3B7Q9H2F3 369 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 ZNF556Q9HAH1 456 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 UBP1Q9NZI7 540 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 GABRR2P28476 465 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 CLCN5P51795 746 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 TMED1Q13445 227 aa17.07■□□□□ 0.32
PCDHA13-202ENST00000409494 GAS2L1Q99501 681 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms