RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 ACOX2Q99424 681 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 LRRC14BA6NHZ5 514 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 CDC40O60508 579 aaKnown RBP eCLIP12.34□□□□□ -0.431e-6■■□□□ 13.8
SHANK2-203ENST00000409161 ALDH7A1P49419 539 aaKnown RBP12.34□□□□□ -0.43
SHANK2-203ENST00000409161 ZNF557Q8N988 423 aaPredicted RBP12.34□□□□□ -0.43
SHANK2-203ENST00000409161 POC5Q8NA72 575 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 FBXO25Q8TCJ0 367 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 ACMSDQ8TDX5 336 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 PCSK2P16519 638 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 GJA8P48165 433 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 KLK7P49862 253 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 CSHL1Q14406 222 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 LPIN1Q14693 890 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 PDK3Q15120 406 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 GATAD2AQ86YP4 633 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 MSL3Q8N5Y2 521 aaKnown RBP12.34□□□□□ -0.43
SHANK2-203ENST00000409161 CHST13Q8NET6 341 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 RASSF5Q8WWW0 418 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 KLHL32Q96NJ5 620 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 FAM118BQ9BPY3 351 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 ITGA11Q9UKX5 1188 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 E9PCH4 1651 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 ITGB3P05106 788 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 NTSP30990 170 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 PGRMC2O15173 223 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 CAMTA2O94983 1202 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 ATF6P18850 670 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 GALNT3Q14435 633 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 PLCL1Q15111 1095 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 PHF10Q8WUB8 498 aaKnown RBP12.34□□□□□ -0.43
SHANK2-203ENST00000409161 PRCCQ92733 491 aaPredicted RBP12.34□□□□□ -0.43
SHANK2-203ENST00000409161 CDRT15Q96T59 188 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 CCDC167Q9P0B6 97 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 ANGPT4Q9Y264 503 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 EFR3BQ9Y2G0 817 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 SEC22BO75396 215 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 BST2Q10589 180 aaKnown RBP12.34□□□□□ -0.43
SHANK2-203ENST00000409161 ATG14Q6ZNE5 492 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 SNIP1Q8TAD8 396 aaKnown RBP12.34□□□□□ -0.43
SHANK2-203ENST00000409161 FAM172AQ8WUF8 416 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 CAPN10Q9HC96 672 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 CIDEBQ9UHD4 219 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 PLA2R1Q13018 1463 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 UNC5CO95185 931 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 OR6A2O95222 327 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 SERPINA1P01009 418 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 MAPTP10636 758 aaKnown RBP12.34□□□□□ -0.43
SHANK2-203ENST00000409161 IRF1P10914 325 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 HLA-DQA1Q5Y7H0 255 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 SLC44A5Q8NCS7 719 aa12.34□□□□□ -0.43
SHANK2-203ENST00000409161 AENQ8WTP8 325 aaKnown RBP12.34□□□□□ -0.43
SHANK2-203ENST00000409161 DLC1Q96QB1 1528 aa12.33□□□□□ -0.43
SHANK2-203ENST00000409161 OGTO15294 1046 aa12.33□□□□□ -0.43
SHANK2-203ENST00000409161 OR56A5P0C7T3 313 aa12.33□□□□□ -0.43
SHANK2-203ENST00000409161 CYP2F1P24903 491 aa12.33□□□□□ -0.43
SHANK2-203ENST00000409161 AKR1D1P51857 326 aa12.33□□□□□ -0.43
SHANK2-203ENST00000409161 SPP2Q13103 211 aa12.33□□□□□ -0.43
SHANK2-203ENST00000409161 SUSD4Q5VX71 490 aa12.33□□□□□ -0.43
SHANK2-203ENST00000409161 EFCAB12Q6NXP0 572 aa12.33□□□□□ -0.43
SHANK2-203ENST00000409161 WDR49Q8IV35 697 aa12.33□□□□□ -0.43
SHANK2-203ENST00000409161 PSMA8Q8TAA3 256 aa12.33□□□□□ -0.43
SHANK2-203ENST00000409161 FBXO32Q969P5 355 aa12.33□□□□□ -0.43
SHANK2-203ENST00000409161 MTMR12Q9C0I1 747 aa12.33□□□□□ -0.43
SHANK2-203ENST00000409161 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.33□□□□□ -0.44
SHANK2-203ENST00000409161 AP3D1O14617 1153 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 CHADO15335 359 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 DGCR6Q14129 220 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 GLRA4Q5JXX5 417 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 DDI2Q5TDH0 399 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 MFSD7Q6UXD7 560 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 SPOCD1Q6ZMY3 1216 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 CD101Q93033 1021 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 PARK7Q99497 189 aaKnown RBP12.33□□□□□ -0.44
SHANK2-203ENST00000409161 LRMDAQ9H2I8 198 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 ABCB10Q9NRK6 738 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 PRPF19Q9UMS4 504 aaKnown RBP12.33□□□□□ -0.44
SHANK2-203ENST00000409161 SNX6Q9UNH7 406 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 DCXO43602 365 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 HMBSP08397 361 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 TSHRP16473 764 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 CXCR2P25025 360 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 PAGE2Q7Z2X7 111 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 ZFP28Q8NHY6 868 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 ZKSCAN4Q969J2 545 aaPredicted RBP12.33□□□□□ -0.44
SHANK2-203ENST00000409161 CHST10O43529 356 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 UGT1A5P35504 534 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 MTMR2Q13614 643 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 ULK3Q6PHR2 472 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 MEIOBQ8N635 442 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 RDH11Q8TC12 318 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 KDM6BO15054 1643 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 A0A087WZ62 844 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 LOC110117498-PIK3R3F6TDL0 507 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 SDC2P34741 201 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 ALDH9A1P49189 494 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 ELF3P78545 371 aaPredicted RBP12.33□□□□□ -0.44
SHANK2-203ENST00000409161 RIPK1Q13546 671 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 PIWIL2Q8TC59 973 aaKnown RBP12.33□□□□□ -0.44
SHANK2-203ENST00000409161 PROCP04070 461 aa12.33□□□□□ -0.44
SHANK2-203ENST00000409161 CDH4P55283 916 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms