RNA–Protein interactions for RNA: ENST00000409057.5

PBRM1-205, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-205ENST00000409057 SLC12A8A0AV02 714 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 KATNA1O75449 491 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 ADRB2P07550 413 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 ERVK-10P10266 1014 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 ALOX12P18054 663 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 GPC1P35052 558 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 ALDH7A1P49419 539 aaKnown RBP10.88□□□□□ -0.67
PBRM1-205ENST00000409057 FMO1Q01740 532 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 TAF5Q15542 800 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 MFSD5Q6N075 450 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 BBS12Q6ZW61 710 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 NECAB2Q7Z6G3 386 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 RASGEF1CQ8N431 466 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 RP9Q8TA86 221 aaKnown RBP10.88□□□□□ -0.67
PBRM1-205ENST00000409057 SPPL2AQ8TCT8 520 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 ALG3Q92685 438 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 AP3M1Q9Y2T2 418 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 A0A087X1B8 175 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 A0A0A0MRY4 1105 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 CD3EAPO15446 510 aaKnown RBP10.88□□□□□ -0.67
PBRM1-205ENST00000409057 TCF3P15923 654 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 GLRA2P23416 452 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 PDZK1Q5T2W1 519 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 NT5DC4Q86YG4 428 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 YAF2Q8IY57 180 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 HASPINQ8TF76 798 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 SPATA13Q96N96 652 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 PORCNQ9H237 461 aa10.88□□□□□ -0.67
PBRM1-205ENST00000409057 TIMM13Q9Y5L4 95 aaPredicted RBP10.88□□□□□ -0.67
PBRM1-205ENST00000409057 E5RJQ4 531 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 HDAC3O15379 428 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 RXRGP48443 463 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 ZNF135P52742 658 aaPredicted RBP10.87□□□□□ -0.67
PBRM1-205ENST00000409057 PLK1P53350 603 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 PSME3P61289 254 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 CTXN3Q4LDR2 81 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 TRIQKQ629K1 86 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 DEFB132Q7Z7B7 95 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 DEFB106AQ8N104 65 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 FAM13CQ8NE31 585 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 C19orf60Q96EN9 201 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 PTCD3Q96EY7 689 aaKnown RBP10.87□□□□□ -0.67
PBRM1-205ENST00000409057 IL22Q9GZX6 179 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 CDHR5Q9HBB8 845 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 FAM220BPB1ANY3 271 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 LBPP18428 481 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 HALP42357 657 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 MAPK10P53779 464 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 TGFB2P61812 414 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 TOP3AQ13472 1001 aaPredicted RBP10.87□□□□□ -0.67
PBRM1-205ENST00000409057 POLNQ7Z5Q5 900 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 SFRP1Q8N474 314 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 FAM81AQ8TBF8 368 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 TRPC4APQ8TEL6 797 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 RNFT2Q96EX2 444 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 MBOAT7Q96N66 472 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 CAMKK2Q96RR4 588 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 CCDC28BQ9BUN5 200 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 WDR18Q9BV38 432 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 DGCR6LQ9BY27 220 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 RIBC2Q9H4K1 309 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 KRCC1Q9NPI7 259 aaPredicted RBP10.87□□□□□ -0.67
PBRM1-205ENST00000409057 CASTOR2A6NHX0 329 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 TRIM38O00635 465 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 EIF2S1P05198 315 aaKnown RBP10.87□□□□□ -0.67
PBRM1-205ENST00000409057 GSTM1P09488 218 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 FGFR3P22607 806 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 GRIA3P42263 894 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 IL12RB1P42701 662 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 TYW3Q6IPR3 259 aaKnown RBP10.87□□□□□ -0.67
PBRM1-205ENST00000409057 RBM44Q6ZP01 1051 aaKnown RBP10.87□□□□□ -0.67
PBRM1-205ENST00000409057 KRT73Q86Y46 540 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 ADHFE1Q8IWW8 467 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 KRT78Q8N1N4 520 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 TMEM161BQ8NDZ6 487 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 MAGEE2Q8TD90 523 aaPredicted RBP10.87□□□□□ -0.67
PBRM1-205ENST00000409057 DGCR14Q96DF8 476 aaKnown RBP10.87□□□□□ -0.67
PBRM1-205ENST00000409057 MRIQ9BWK5 157 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 CXCL11O14625 94 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 NKRFO15226 690 aaKnown RBP eCLIP10.87□□□□□ -0.67
PBRM1-205ENST00000409057 RAD51BO15315 384 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 GRIN3BO60391 1043 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 TSC22D2O75157 780 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 USP12O75317 370 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 SNRPB2P08579 225 aaKnown RBP10.87□□□□□ -0.67
PBRM1-205ENST00000409057 AKAP5P24588 427 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 FLT3P36888 993 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 EVX2Q03828 476 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 TRIM71Q2Q1W2 868 aaKnown RBP10.87□□□□□ -0.67
PBRM1-205ENST00000409057 TIMM50Q3ZCQ8 353 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 ATP13A4Q4VNC1 1196 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 NEPROQ6NW34 567 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 ABRAXAS1Q6UWZ7 409 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 SLC2A14Q8TDB8 520 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 CERS2Q96G23 380 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 ZFP42Q96MM3 310 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 P2RX7Q99572 595 aaKnown RBP10.87□□□□□ -0.67
PBRM1-205ENST00000409057 COQ7Q99807 217 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 HSD17B14Q9BPX1 270 aa10.87□□□□□ -0.67
PBRM1-205ENST00000409057 SPAG4Q9NPE6 437 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms