RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 TRIM72Q6ZMU5 477 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 ENOSF1Q7L5Y1 443 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 PXKQ7Z7A4 578 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 LINC01465Q8N7H1 131 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 ABHD11Q8NFV4 315 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 OR52L2PQ8NGH6 319 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 CLEC4CQ8WTT0 213 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 DDB2Q92466 427 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 PRR11Q96HE9 360 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 RITA1Q96K30 269 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 SNX18Q96RF0 628 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 NR1H4Q96RI1 486 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 INTS2Q9H0H0 1204 aaKnown RBP5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 PDCL3Q9H2J4 239 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 SAP30LQ9HAJ7 183 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 BRF2Q9HAW0 419 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 PDE11AQ9HCR9 933 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 VPS28Q9UK41 221 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 PSAT1Q9Y617 370 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 RUSC2Q8N2Y8 1516 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 KAT6AQ92794 2004 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 C3orf70A6NLC5 250 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 GRM8O00222 908 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 TNFSF14O43557 240 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 CA12O43570 354 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 MBPP02686 304 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 WEE2P0C1S8 567 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 HSPA1AP0DMV8 641 aaKnown RBP5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 HSPA1BP0DMV9 641 aaKnown RBP5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 IGHMBP2P38935 993 aaKnown RBP5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 MLH1P40692 756 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 CUL4AQ13619 759 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 CBFBQ13951 182 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 FAM133BQ5BKY9 247 aaKnown RBP5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 ZNF766Q5HY98 468 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 ZKSCAN2Q63HK3 967 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 WDR93Q6P2C0 686 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 ATF7IPQ6VMQ6 1270 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 C1QL2Q7Z5L3 287 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 CHSY1Q86X52 802 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 P3H2Q8IVL5 708 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 PNPLA1Q8N8W4 532 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 KCNG4Q8TDN1 519 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 RNFT2Q96EX2 444 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 DPCDQ9BVM2 203 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 SLC25A18Q9H1K4 315 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 CDCP1Q9H5V8 836 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 HAUS2Q9NVX0 235 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 CAMK2AQ9UQM7 478 aa5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 COPG1Q9Y678 874 aaKnown RBP5.36□□□□□ -1.55
HMGB1P13-201ENST00000406019 DNAJC9-AS1A6NH13 148 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 NPIPB15A6NHN6 443 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 CCER2I3L3R5 266 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 AP4M1O00189 453 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 TSPAN4O14817 238 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 DLDP09622 509 aaKnown RBP5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 CREB1P16220 341 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 PRKCHP24723 683 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 MVDP53602 400 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 SRSF4Q08170 494 aaKnown RBP5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 TMEM119Q4V9L6 283 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 PRAMEF17Q5VTA0 474 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 BCDIN3DQ7Z5W3 292 aaKnown RBP5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 CPLX4Q7Z7G2 160 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 SFTPA1Q8IWL2 248 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 RPAP2Q8IXW5 612 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 FAM9BQ8IZU0 186 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 ZNF366Q8N895 744 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 TERB1Q8NA31 727 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 RFWD2Q8NHY2 731 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 METTL6Q8TCB7 284 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 SH3KBP1Q96B97 665 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 KAZALD1Q96I82 304 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 CLSTN3Q9BQT9 956 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 ELOVL1Q9BW60 279 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 CLPBQ9H078 707 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 MUC13Q9H3R2 512 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 MTMR4Q9NYA4 1195 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 HCN3Q9P1Z3 774 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 SUFUQ9UMX1 484 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 PCDHB2Q9Y5E7 798 aa5.35□□□□□ -1.55
HMGB1P13-201ENST00000406019 A0A1W2PQM1 296 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 TGFB1I1O43294 461 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 TMPRSS11DO60235 418 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 METTL18O95568 372 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 TMIGD3P0DMS9 266 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 APEHP13798 732 aaKnown RBP5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 ARSAP15289 507 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 MATN1P21941 496 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 TM4SF1P30408 202 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 GALNSP34059 522 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 SUMO2P61956 95 aaKnown RBP5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 TUBA4AP68366 448 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 CDK18Q07002 472 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 MAMLD1Q13495 774 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 TDGQ13569 410 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 ACVR2BQ13705 512 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 TBC1D25Q3MII6 688 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 KIAA1614Q5VZ46 1190 aa5.34□□□□□ -1.55
HMGB1P13-201ENST00000406019 PTCHD4Q6ZW05 846 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms